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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS02310 and DZA65_RS02315 are separated by 688 nucleotides
DZA65_RS02315 and DZA65_RS02320 are separated by 45 nucleotides
DZA65_RS02320 and DZA65_RS02325 are separated by 9 nucleotides
DZA65_RS02325 and DZA65_RS02330 are separated by 105 nucleotides
DZA65_RS02310: DZA65_RS02310 - delta-endotoxin CytB, at 498,528 to 499,163
_RS02310
DZA65_RS02315: DZA65_RS02315 - ABC transporter substrate-binding protein, at 499,852 to 501,399
_RS02315
DZA65_RS02320: DZA65_RS02320 - ABC transporter permease, at 501,445 to 502,362
_RS02320
DZA65_RS02325: DZA65_RS02325 - ABC transporter permease, at 502,372 to 503,298
_RS02325
DZA65_RS02330: DZA65_RS02330 - ABC transporter ATP-binding protein, at 503,404 to 504,381
_RS02330
Group
Condition
DZA65
_RS02310
DZA65
_RS02315
DZA65
_RS02320
DZA65
_RS02325
DZA65
_RS02330
plant
Stem-Upstate
+0.4
-0.3
-0.6
-0.4
-0.7
plant
Stem-Upstate
-0.1
+0.0
-0.5
-0.2
-0.1
plant
Stem-Upstate
+0.0
-0.1
-0.2
-0.1
-0.4
plant
Stem-Norland
-0.3
-0.0
-0.1
-0.3
+0.1
plant
Stem-Upstate
+0.4
+0.2
-0.4
-0.4
-0.5
carbon source
M9+sucrose
-0.1
+0.1
-0.1
+0.0
-0.5
plant
Stem-Norland
+0.2
-0.0
-0.4
-0.2
-0.1
carbon source
M9+sucrose
+0.2
+0.1
-0.2
-0.1
-0.3
plant
Stem-Norland
-0.5
-0.1
-0.1
-0.2
+0.6
control
LB
+0.1
-0.1
-0.4
+0.2
-0.0
carbon source
M9+glycerol
+0.0
+0.1
+0.3
-0.2
-0.3
plant
Stem-Norland
-0.4
+0.1
+0.0
-0.3
+0.5
plant
Stem-Norland
-0.2
+0.1
-0.2
-0.1
+0.4
carbon source
M9+starch
+0.4
+0.1
-0.0
-0.0
-0.4
plant
Norland
+0.3
-0.1
+0.2
+0.1
-0.2
carbon source
M9+sucrose
+0.3
-0.0
+0.2
-0.0
-0.3
stress
3.75mM_PTB
+0.3
-0.1
-0.2
+0.2
-0.0
stress
3.75mM_PTB
+0.5
+0.0
-0.2
+0.1
-0.1
plant
Stem-Norland
-0.2
+0.0
+0.5
+0.0
-0.1
plant
Stem-Upstate
+0.4
+0.2
+0.3
-0.2
-0.3
plant
Stem-Norland
-0.1
-0.0
+0.3
+0.2
+0.1
plant
Stem-Norland
+0.2
-0.1
+0.6
-0.1
-0.0
plant
Norland
+0.4
-0.1
-0.1
+0.1
+0.1
control
PDB
+0.3
-0.1
+0.1
+0.1
+0.1
carbon source
M9+polygalacturonate
+0.4
-0.0
+0.1
-0.1
+0.3
plant
Atlantic
+0.7
-0.1
-0.0
+0.0
+0.1
plant
Norland
+0.5
-0.0
+0.1
+0.1
+0.1
plant
Stem-Upstate
+0.2
+0.4
+0.5
-0.1
-0.3
plant
Upstate
+0.3
-0.0
+0.2
+0.1
+0.2
plant
Norland
+0.5
-0.0
+0.4
+0.2
-0.1
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