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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS02180 and DZA65_RS02185 are separated by 51 nucleotides
DZA65_RS02185 and DZA65_RS02195 are separated by 297 nucleotides
DZA65_RS02195 and DZA65_RS02200 are separated by 149 nucleotides
DZA65_RS02200 and DZA65_RS02205 are separated by 472 nucleotides
DZA65_RS02180: DZA65_RS02180 - IS5 family transposase, at 475,529 to 476,373
_RS02180
DZA65_RS02185: DZA65_RS02185 - DUF1778 domain-containing protein, at 476,425 to 476,646
_RS02185
DZA65_RS02195: DZA65_RS02195 - hypothetical protein, at 476,944 to 478,332
_RS02195
DZA65_RS02200: DZA65_RS02200 - hypothetical protein, at 478,482 to 478,820
_RS02200
DZA65_RS02205: DZA65_RS02205 - hypothetical protein, at 479,293 to 480,096
_RS02205
Group
Condition
DZA65
_RS02180
DZA65
_RS02185
DZA65
_RS02195
DZA65
_RS02200
DZA65
_RS02205
plant
Stem-Norland
-1.6
-0.1
+0.2
-0.2
-0.0
plant
Stem-Norland
-0.5
-0.2
+0.0
-0.7
+0.1
control
LB
-0.2
-0.3
-0.0
-0.7
+0.0
stress
1.88mM_PTB
-0.6
-0.1
-0.1
-0.3
-0.1
stress
3.75mM_PTB
-0.4
-0.2
+0.0
-0.3
-0.2
plant
Atlantic
-0.2
-0.1
-0.1
-0.9
+0.2
plant
Atlantic
-0.4
+0.1
+0.2
-1.0
+0.1
plant
Stem-Atlantic
-0.2
+0.1
+0.1
-1.0
+0.2
plant
Stem-Upstate
+0.0
-0.4
+0.3
-0.8
+0.1
control
PDB
-0.3
-0.3
-0.0
-0.3
+0.2
carbon source
M9+starch
-0.5
+0.2
-0.1
-0.3
+0.0
control
LB
-0.5
+0.2
-0.1
-0.2
+0.0
plant
Stem-Upstate
-0.2
-0.4
+0.4
-0.2
+0.1
plant
Atlantic
-0.3
-0.0
-0.1
+0.5
-0.1
plant
Stem-Norland
+0.6
+0.4
-0.1
-0.8
-0.1
plant
Stem-Atlantic
+0.2
-0.2
+0.3
-0.3
-0.0
plant
Stem-Norland
+0.1
+0.4
+0.1
-0.1
-0.4
plant
Stem-Norland
+1.1
-0.4
-0.0
-0.2
-0.1
plant
Stem-Upstate
+0.5
+0.7
-0.2
-0.7
+0.1
plant
Norland
+0.1
-0.4
+0.2
+0.4
+0.1
plant
Stem-Norland
-0.6
+0.3
+0.4
+0.1
+0.3
plant
Stem-Norland
+0.3
+0.3
+0.1
-0.4
+0.3
plant
Stem-Atlantic
-0.1
+0.6
+0.1
+0.2
-0.2
plant
Stem-Upstate
+0.6
-0.3
+0.7
-0.2
-0.2
plant
Stem-Upstate
-0.7
+0.5
+0.2
+0.4
+0.4
plant
Norland
+0.0
-0.0
+0.1
+0.8
+0.1
plant
Upstate
+0.9
-0.1
+0.1
+0.1
+0.0
plant
Stem-Atlantic
+0.4
+0.3
+0.2
+0.2
+0.1
plant
Stem-Upstate
+0.3
+0.7
-0.0
+0.7
+0.1
plant
Stem-Norland
+0.4
+0.5
-0.0
+1.3
-0.2
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