Fitness for 5 genes in Dickeya dianthicola ME23

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500 ntDZA65_RS01670 and DZA65_RS01675 are separated by 73 nucleotidesDZA65_RS01675 and DZA65_RS01680 overlap by 43 nucleotidesDZA65_RS01680 and DZA65_RS01685 are separated by 59 nucleotidesDZA65_RS01685 and DZA65_RS01695 are separated by 598 nucleotides DZA65_RS01670: DZA65_RS01670 - DnaA initiator-associating protein DiaA, at 363,798 to 364,388 _RS01670 DZA65_RS01675: DZA65_RS01675 - YraN family protein, at 364,462 to 364,857 _RS01675 DZA65_RS01680: DZA65_RS01680 - penicillin-binding protein activator, at 364,815 to 366,866 _RS01680 DZA65_RS01685: DZA65_RS01685 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase, at 366,926 to 367,795 _RS01685 DZA65_RS01695: DZA65_RS01695 - 4,5-DOPA dioxygenase extradiol, at 368,394 to 369,182 _RS01695
Group Condition DZA65_RS01670 DZA65_RS01675 DZA65_RS01680 DZA65_RS01685 DZA65_RS01695
stress 3.75mM_PTB -0.9 -0.4 -0.4 -0.3 +0.1
plant Stem-Upstate -0.1 -0.3 -0.6 -1.0 +0.2
plant Stem-Atlantic +0.0 -0.3 -0.6 -0.7 +0.2
plant Stem-Norland +0.3 -0.6 -0.6 -0.3 -0.1
plant Stem-Norland -0.3 -0.2 -0.7 -0.4 +0.3
plant Stem-Upstate -0.7 +0.3 -1.0 +0.1 -0.0
plant Upstate +0.1 -0.3 -0.6 -0.1 -0.4
control LB +0.3 -0.4 -0.2 -0.5 +0.0
plant Stem-Atlantic +0.2 -0.2 -0.1 -0.8 +0.2
plant Stem-Norland -0.1 -0.5 -0.6 +0.5 +0.1
plant Stem-Upstate +0.2 -1.2 -0.5 +0.8 +0.2
plant Stem-Norland +0.7 -0.6 -0.5 -0.2 +0.0
plant Stem-Norland +0.3 -0.7 -0.2 +0.4 +0.1
plant Stem-Upstate -0.3 +0.2 -0.4 +0.2 +0.3
plant Stem-Upstate +0.3 +0.3 -0.3 -0.6 +0.6
control PDB +0.9 -0.0 -0.3 -0.4 -0.0
plant Stem-Atlantic +0.1 +0.4 -0.1 -0.5 +0.3
control PDB +0.7 +0.2 -0.3 -0.6 +0.3
control PDB +0.3 +0.4 -0.6 +0.2 +0.1
carbon source M9+sucrose +0.6 +0.1 -0.2 -0.3 +0.2
carbon source M9+polygalacturonate +0.7 +0.5 -0.2 -0.4 +0.0
carbon source M9+starch +0.4 +0.5 -0.0 -0.4 +0.1
plant Stem-Upstate +0.3 +0.1 -0.5 +0.4 +0.4
control PDB +0.6 +0.2 -0.5 +0.3 +0.0
plant Norland +0.6 +0.4 -0.3 +0.1 -0.1
carbon source M9+glycerol +0.5 +0.4 +0.2 +0.2 +0.1
carbon source M9+glycerol +0.7 +0.1 +0.1 +0.6 -0.0
carbon source M9+glycerol +0.4 +0.5 +0.7 +0.0 -0.0
carbon source M9+glycerol +0.9 -0.1 +0.5 +0.3 +0.1
carbon source M9+glycerol +0.8 -0.2 +1.0 +0.3 -0.1
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