Fitness for 5 genes in Dickeya dianthicola ME23

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500 ntDZA65_RS01635 and DZA65_RS01640 are separated by 717 nucleotidesDZA65_RS01640 and DZA65_RS01645 are separated by 93 nucleotidesDZA65_RS01645 and DZA65_RS01650 are separated by 235 nucleotidesDZA65_RS01650 and DZA65_RS01655 overlap by 4 nucleotides DZA65_RS01635: DZA65_RS01635 - glutamate synthase large subunit, at 351,506 to 355,966 _RS01635 DZA65_RS01640: DZA65_RS01640 - TIGR01212 family radical SAM protein, at 356,684 to 357,613 _RS01640 DZA65_RS01645: DZA65_RS01645 - aerobic respiration two-component sensor histidine kinase ArcB, at 357,707 to 360,046 _RS01645 DZA65_RS01650: DZA65_RS01650 - isoprenoid biosynthesis glyoxalase ElbB, at 360,282 to 360,935 _RS01650 DZA65_RS01655: DZA65_RS01655 - monofunctional biosynthetic peptidoglycan transglycosylase, at 360,932 to 361,681 _RS01655
Group Condition DZA65_RS01635 DZA65_RS01640 DZA65_RS01645 DZA65_RS01650 DZA65_RS01655
carbon source M9+sucrose -2.6 +0.1 -0.3 -0.3 +0.2
carbon source M9+polygalacturonate -2.9 -0.2 +0.2 -0.1 +0.1
carbon source M9+glycerol -2.4 +0.0 -0.1 -0.2 +0.0
carbon source M9+polygalacturonate -2.9 -0.0 +0.1 -0.1 +0.2
carbon source M9+glycerol -2.6 +0.1 -0.0 -0.2 +0.1
carbon source M9+polygalacturonate -3.0 -0.1 +0.3 +0.1 +0.2
carbon source M9+sucrose -2.4 -0.1 -0.2 -0.2 +0.3
carbon source M9+glycerol -2.8 +0.1 -0.1 +0.1 +0.3
carbon source M9+glycerol -2.4 +0.0 -0.0 -0.1 +0.1
carbon source M9+sucrose -2.5 +0.0 -0.3 +0.1 +0.4
carbon source M9+glycerol -2.7 +0.1 +0.0 +0.0 +0.4
carbon source M9+glycerol -2.7 +0.1 +0.3 -0.1 +0.4
carbon source M9+starch -2.4 +0.0 +0.4 -0.1 +0.1
carbon source M9+starch -2.3 +0.0 +0.3 +0.1 +0.0
carbon source M9+starch -2.1 -0.1 +0.3 +0.1 +0.2
control PDB -0.6 +0.0 -0.3 -0.3 -0.1
plant Stem-Norland -1.1 -0.1 -0.2 +0.1 +0.2
plant Stem-Upstate -0.5 +0.0 -0.5 +0.2 -0.2
plant Stem-Atlantic +0.0 -0.0 -1.0 +0.2 -0.1
control PDB -0.5 -0.1 -0.3 +0.2 -0.2
plant Stem-Norland +0.0 +0.1 -0.5 -0.4 +0.1
plant Stem-Upstate -0.7 -0.3 +0.2 +0.4 +0.1
control PDB -0.5 +0.1 +0.1 -0.1 +0.3
control PDB -0.5 +0.0 +0.4 -0.1 +0.1
plant Upstate -0.1 -0.2 -0.3 +0.3 +0.3
plant Stem-Upstate +0.1 -0.3 +0.1 -0.2 +0.3
plant Stem-Norland +0.2 +0.1 -0.5 +0.5 -0.2
plant Atlantic -0.4 +0.1 +0.2 +0.4 +0.1
plant Stem-Upstate -0.1 +0.2 +0.4 +0.3 +0.1
plant Norland -0.2 +0.1 +0.6 +0.4 +0.0
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DZA65_RS01635
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DZA65_RS01640
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DZA65_RS01655
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