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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS01540 and DZA65_RS01545 are separated by 280 nucleotides
DZA65_RS01545 and DZA65_RS01550 are separated by 3 nucleotides
DZA65_RS01550 and DZA65_RS01555 are separated by 4 nucleotides
DZA65_RS01555 and DZA65_RS01560 are separated by 11 nucleotides
DZA65_RS01540: DZA65_RS01540 - calcium/sodium antiporter, at 336,450 to 337,412
_RS01540
DZA65_RS01545: DZA65_RS01545 - phospholipid ABC transporter ATP-binding protein MlaF, at 337,693 to 338,502
_RS01545
DZA65_RS01550: DZA65_RS01550 - lipid asymmetry maintenance ABC transporter permease subunit MlaE, at 338,506 to 339,288
_RS01550
DZA65_RS01555: DZA65_RS01555 - outer membrane lipid asymmetry maintenance protein MlaD, at 339,293 to 339,907
_RS01555
DZA65_RS01560: DZA65_RS01560 - phospholipid-binding protein MlaC, at 339,919 to 340,572
_RS01560
Group
Condition
DZA65
_RS01540
DZA65
_RS01545
DZA65
_RS01550
DZA65
_RS01555
DZA65
_RS01560
plant
Stem-Upstate
-0.6
-1.3
-1.4
-1.1
-1.9
carbon source
M9+starch
-0.1
-1.8
-1.1
-1.0
-1.8
plant
Stem-Upstate
-0.6
-1.0
-1.2
-0.7
-1.7
carbon source
M9+starch
-0.0
-1.6
-1.0
-0.6
-1.7
carbon source
M9+starch
+0.1
-1.5
-1.0
-0.9
-1.6
plant
Stem-Atlantic
-0.5
-1.7
-1.0
-0.7
-1.0
plant
Atlantic
-0.3
-1.2
-1.0
-0.9
-1.2
plant
Stem-Norland
-0.3
-1.2
-1.4
-0.7
-1.0
plant
Stem-Norland
-0.0
-1.2
-1.0
-0.6
-1.6
plant
Norland
-0.5
-0.9
-1.1
-0.6
-1.2
plant
Stem-Atlantic
-0.4
-1.3
-1.2
-0.3
-0.8
plant
Stem-Norland
-0.1
-1.7
-0.9
-0.5
-0.8
plant
Stem-Atlantic
-0.3
-1.2
-1.0
-0.5
-1.0
plant
Upstate
-0.4
-1.2
-0.9
-0.5
-1.0
plant
Stem-Norland
-0.1
-0.8
-1.1
-0.8
-1.0
plant
Stem-Norland
-0.2
-1.6
-0.6
-0.6
-0.9
plant
Upstate
-0.2
-1.1
-0.9
-0.4
-1.2
plant
Upstate
-0.3
-1.0
-1.0
-0.3
-1.0
plant
Upstate
-0.6
-0.8
-0.6
-0.6
-1.0
plant
Atlantic
-0.3
-1.4
-0.5
-0.5
-0.9
plant
Stem-Norland
+0.0
-1.1
-0.7
-0.5
-1.2
control
PDB
-0.4
-1.0
-0.5
-0.8
-0.7
plant
Upstate
-0.5
-0.9
-1.0
-0.4
-0.6
plant
Stem-Atlantic
-0.2
-1.2
-0.5
-0.6
-0.7
plant
Stem-Upstate
-0.1
-0.8
-0.9
-0.7
-0.6
control
PDB
-0.4
-0.7
-0.8
-0.7
-0.6
carbon source
M9+polygalacturonate
-0.0
-0.7
-0.8
-0.7
-0.9
plant
Stem-Upstate
+0.1
-1.2
-0.7
-0.4
-0.8
carbon source
M9+glycerol
+0.1
+1.1
+0.7
+0.5
+0.9
carbon source
M9+glycerol
+0.2
+1.1
+1.4
+1.3
+1.4
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