Fitness for 5 genes in Dickeya dianthicola ME23

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Top 30 experiments (either direction), sorted by average fitness

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500 ntDZA65_RS01525 and DZA65_RS01530 overlap by 4 nucleotidesDZA65_RS01530 and DZA65_RS01535 are separated by 47 nucleotidesDZA65_RS01535 and DZA65_RS01540 are separated by 30 nucleotidesDZA65_RS01540 and DZA65_RS01545 are separated by 280 nucleotides DZA65_RS01525: DZA65_RS01525 - LPS export ABC transporter periplasmic protein LptC, at 334,253 to 334,822 _RS01525 DZA65_RS01530: DZA65_RS01530 - 3-deoxy-manno-octulosonate-8-phosphatase KdsC, at 334,819 to 335,385 _RS01530 DZA65_RS01535: DZA65_RS01535 - arabinose-5-phosphate isomerase KdsD, at 335,433 to 336,419 _RS01535 DZA65_RS01540: DZA65_RS01540 - calcium/sodium antiporter, at 336,450 to 337,412 _RS01540 DZA65_RS01545: DZA65_RS01545 - phospholipid ABC transporter ATP-binding protein MlaF, at 337,693 to 338,502 _RS01545
Group Condition DZA65_RS01525 DZA65_RS01530 DZA65_RS01535 DZA65_RS01540 DZA65_RS01545
plant Stem-Atlantic -3.1 -1.0 N.D. -0.5 -1.7
plant Stem-Norland -3.5 -0.9 N.D. -0.1 -1.7
plant Stem-Atlantic -3.1 -0.9 N.D. -0.4 -1.3
plant Stem-Upstate -2.9 -0.7 N.D. -0.6 -1.3
plant Stem-Atlantic -2.8 -0.8 N.D. -0.2 -1.2
plant Stem-Atlantic -2.3 -1.2 N.D. -0.1 -1.3
plant Stem-Atlantic -2.8 -0.5 N.D. -0.3 -1.2
plant Stem-Upstate -2.6 -0.6 N.D. -0.6 -1.0
plant Stem-Norland -3.0 -0.9 N.D. -0.1 -0.8
plant Stem-Norland -3.1 -1.2 N.D. -0.3 +0.0
plant Stem-Upstate -2.6 -0.8 N.D. -0.1 -0.8
plant Stem-Norland -2.5 -0.4 N.D. -0.0 -1.2
plant Stem-Norland -2.2 -0.7 N.D. +0.0 -1.1
stress 1.88mM_PTB -3.5 +0.0 N.D. -0.4 +0.0
plant Upstate -1.7 -0.5 N.D. -0.4 -1.2
plant Upstate -1.9 -0.5 N.D. -0.6 -0.8
plant Atlantic -1.3 -0.7 N.D. -0.3 -1.4
control PDB -1.8 -0.4 N.D. -0.5 -0.8
plant Stem-Atlantic -1.9 -0.5 N.D. -0.3 -0.6
control PDB -1.9 -0.4 N.D. -0.4 -0.7
stress 1.88mM_PTB -3.5 -0.1 N.D. -0.2 +0.4
plant Upstate -1.4 -0.7 N.D. -0.2 -1.1
control PDB -1.5 -0.3 N.D. -0.4 -1.0
plant Stem-Upstate -1.6 -0.6 N.D. +0.1 -1.2
control LB -3.2 +0.2 N.D. -0.4 +0.3
stress 1.88mM_PTB -3.6 +0.1 N.D. -0.1 +0.5
plant Stem-Atlantic -1.5 -0.0 N.D. -0.3 -1.2
plant Stem-Upstate -2.6 -0.4 N.D. +0.2 -0.2
stress 3.75mM_PTB -2.1 +0.3 N.D. +0.1 +0.9
carbon source M9+glycerol +1.1 +0.6 N.D. +0.2 +1.1
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DZA65_RS01525
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