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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS01395 and DZA65_RS01400 are separated by 212 nucleotides
DZA65_RS01400 and DZA65_RS01405 are separated by 152 nucleotides
DZA65_RS01405 and DZA65_RS01410 are separated by 314 nucleotides
DZA65_RS01410 and DZA65_RS01415 are separated by 103 nucleotides
DZA65_RS01395: DZA65_RS01395 - protein-methionine-sulfoxide reductase catalytic subunit MsrP, at 305,948 to 306,949
_RS01395
DZA65_RS01400: DZA65_RS01400 - oxidoreductase, at 307,162 to 308,148
_RS01400
DZA65_RS01405: DZA65_RS01405 - RNase E specificity factor CsrD, at 308,301 to 310,247
_RS01405
DZA65_RS01410: DZA65_RS01410 - rod shape-determining protein MreB, at 310,562 to 311,605
_RS01410
DZA65_RS01415: DZA65_RS01415 - rod shape-determining protein MreC, at 311,709 to 312,827
_RS01415
Group
Condition
DZA65
_RS01395
DZA65
_RS01400
DZA65
_RS01405
DZA65
_RS01410
DZA65
_RS01415
plant
Stem-Upstate
+0.2
-0.2
-1.5
N.D.
N.D.
plant
Stem-Upstate
-0.1
-0.2
-0.9
N.D.
N.D.
plant
Stem-Upstate
-0.1
+0.3
-1.2
N.D.
N.D.
plant
Stem-Upstate
-0.2
+0.4
-1.2
N.D.
N.D.
plant
Stem-Norland
+0.2
+0.1
-1.3
N.D.
N.D.
plant
Upstate
-0.0
-0.1
-0.9
N.D.
N.D.
plant
Stem-Atlantic
-0.0
+0.1
-1.0
N.D.
N.D.
plant
Stem-Norland
-0.0
-0.1
-0.7
N.D.
N.D.
plant
Atlantic
-0.0
+0.3
-1.0
N.D.
N.D.
plant
Atlantic
-0.1
+0.3
-0.9
N.D.
N.D.
carbon source
M9+starch
-0.0
+0.0
-0.7
N.D.
N.D.
plant
Upstate
+0.0
+0.2
-0.9
N.D.
N.D.
plant
Upstate
+0.1
-0.1
-0.6
N.D.
N.D.
plant
Norland
-0.0
+0.2
-0.8
N.D.
N.D.
plant
Stem-Norland
+0.0
+0.6
-1.3
N.D.
N.D.
plant
Stem-Upstate
-0.1
+0.3
-0.7
N.D.
N.D.
control
PDB
+0.1
+0.0
-0.7
N.D.
N.D.
plant
Atlantic
+0.1
+0.2
-0.7
N.D.
N.D.
plant
Stem-Norland
+0.2
+0.3
-0.9
N.D.
N.D.
plant
Norland
-0.1
+0.3
-0.6
N.D.
N.D.
control
PDB
+0.1
+0.1
-0.6
N.D.
N.D.
plant
Stem-Atlantic
+0.2
-0.1
-0.4
N.D.
N.D.
plant
Stem-Atlantic
-0.0
+0.2
-0.6
N.D.
N.D.
plant
Upstate
+0.1
+0.2
-0.6
N.D.
N.D.
plant
Atlantic
+0.0
+0.2
-0.6
N.D.
N.D.
plant
Stem-Atlantic
+0.0
+0.3
-0.6
N.D.
N.D.
plant
Atlantic
+0.0
+0.3
-0.5
N.D.
N.D.
plant
Atlantic
+0.1
+0.3
-0.5
N.D.
N.D.
plant
Stem-Norland
+0.3
+0.1
-0.4
N.D.
N.D.
plant
Stem-Upstate
+0.6
+0.1
-0.2
N.D.
N.D.
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