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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS01245 and DZA65_RS01250 are separated by 4 nucleotides
DZA65_RS01250 and DZA65_RS01255 are separated by 82 nucleotides
DZA65_RS01255 and DZA65_RS01260 are separated by 15 nucleotides
DZA65_RS01260 and DZA65_RS01265 are separated by 598 nucleotides
DZA65_RS01245: DZA65_RS01245 - DNA-binding protein HU-alpha, at 277,495 to 277,767
_RS01245
DZA65_RS01250: DZA65_RS01250 - DUF1481 domain-containing protein, at 277,772 to 278,500
_RS01250
DZA65_RS01255: DZA65_RS01255 - phosphoribosylamine--glycine ligase, at 278,583 to 279,872
_RS01255
DZA65_RS01260: DZA65_RS01260 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, at 279,888 to 281,477
_RS01260
DZA65_RS01265: DZA65_RS01265 - 16S ribosomal RNA, at 282,076 to 283,623
_RS01265
Group
Condition
DZA65
_RS01245
DZA65
_RS01250
DZA65
_RS01255
DZA65
_RS01260
DZA65
_RS01265
carbon source
M9+polygalacturonate
N.D.
-0.0
-2.8
-3.6
N.D.
carbon source
M9+polygalacturonate
N.D.
-0.2
-2.6
-3.2
N.D.
plant
Stem-Norland
N.D.
-0.1
-2.2
-3.3
N.D.
carbon source
M9+polygalacturonate
N.D.
+0.0
-2.2
-3.4
N.D.
plant
Stem-Norland
N.D.
-0.1
-2.2
-2.8
N.D.
plant
Stem-Atlantic
N.D.
-0.1
-2.0
-2.8
N.D.
plant
Stem-Atlantic
N.D.
+0.1
-2.1
-2.9
N.D.
plant
Stem-Atlantic
N.D.
+0.1
-2.3
-2.8
N.D.
carbon source
M9+glycerol
N.D.
-0.1
-2.3
-2.5
N.D.
plant
Stem-Atlantic
N.D.
+0.0
-1.9
-2.9
N.D.
carbon source
M9+sucrose
N.D.
+0.3
-2.0
-3.0
N.D.
carbon source
M9+sucrose
N.D.
+0.1
-1.9
-2.9
N.D.
carbon source
M9+glycerol
N.D.
-0.1
-2.0
-2.5
N.D.
carbon source
M9+glycerol
N.D.
+0.2
-1.9
-2.9
N.D.
plant
Stem-Atlantic
N.D.
-0.0
-2.1
-2.4
N.D.
plant
Stem-Atlantic
N.D.
-0.2
-1.9
-2.4
N.D.
carbon source
M9+glycerol
N.D.
+0.2
-2.1
-2.6
N.D.
plant
Stem-Norland
N.D.
-0.2
-2.1
-2.2
N.D.
plant
Stem-Upstate
N.D.
-0.0
-1.5
-2.9
N.D.
carbon source
M9+glycerol
N.D.
+0.1
-1.7
-2.7
N.D.
carbon source
M9+sucrose
N.D.
+0.1
-1.8
-2.5
N.D.
plant
Stem-Upstate
N.D.
-0.2
-1.7
-2.3
N.D.
carbon source
M9+glycerol
N.D.
-0.1
-1.8
-2.3
N.D.
plant
Stem-Norland
N.D.
+0.0
-1.9
-2.3
N.D.
plant
Stem-Upstate
N.D.
+0.2
-1.8
-2.4
N.D.
plant
Stem-Norland
N.D.
+0.1
-1.6
-2.2
N.D.
plant
Atlantic
N.D.
+0.1
-1.5
-2.3
N.D.
plant
Stem-Upstate
N.D.
+0.6
-2.0
-2.3
N.D.
plant
Norland
N.D.
+0.2
-1.8
-1.9
N.D.
plant
Norland
N.D.
+0.2
-1.5
-2.1
N.D.
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