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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS00975 and DZA65_RS00980 are separated by 3 nucleotides
DZA65_RS00980 and DZA65_RS00985 are separated by 113 nucleotides
DZA65_RS00985 and DZA65_RS00990 are separated by 2 nucleotides
DZA65_RS00990 and DZA65_RS00995 are separated by 31 nucleotides
DZA65_RS00975: DZA65_RS00975 - Sec-independent protein translocase subunit TatB, at 223,030 to 223,602
_RS00975
DZA65_RS00980: DZA65_RS00980 - Sec-independent protein translocase subunit TatC, at 223,606 to 224,373
_RS00980
DZA65_RS00985: DZA65_RS00985 - 3'-5' ssDNA/RNA exonuclease TatD, at 224,487 to 225,281
_RS00985
DZA65_RS00990: DZA65_RS00990 - porphobilinogen synthase, at 225,284 to 226,306
_RS00990
DZA65_RS00995: DZA65_RS00995 - transcription/translation regulatory transformer protein RfaH, at 226,338 to 226,826
_RS00995
Group
Condition
DZA65
_RS00975
DZA65
_RS00980
DZA65
_RS00985
DZA65
_RS00990
DZA65
_RS00995
plant
Stem-Norland
N.D.
-2.5
-0.1
N.D.
-0.2
plant
Stem-Norland
N.D.
-2.6
+0.3
N.D.
-0.4
plant
Stem-Norland
N.D.
-2.2
-0.1
N.D.
-0.3
plant
Stem-Upstate
N.D.
-3.0
+0.1
N.D.
+0.3
plant
Stem-Norland
N.D.
-1.9
-0.2
N.D.
-0.3
plant
Stem-Atlantic
N.D.
-2.5
+0.1
N.D.
+0.0
plant
Stem-Atlantic
N.D.
-1.8
-0.2
N.D.
-0.3
plant
Stem-Norland
N.D.
-2.6
+0.3
N.D.
-0.0
plant
Stem-Upstate
N.D.
-2.2
+0.1
N.D.
-0.1
plant
Stem-Upstate
N.D.
-2.1
+0.1
N.D.
-0.2
plant
Stem-Norland
N.D.
-2.3
+0.4
N.D.
-0.2
plant
Stem-Norland
N.D.
-1.7
-0.1
N.D.
-0.2
plant
Stem-Atlantic
N.D.
-1.9
-0.3
N.D.
+0.2
plant
Stem-Norland
N.D.
-1.8
+0.1
N.D.
-0.2
plant
Stem-Atlantic
N.D.
-1.9
-0.1
N.D.
+0.1
plant
Stem-Upstate
N.D.
-2.0
+0.4
N.D.
-0.3
plant
Stem-Atlantic
N.D.
-1.7
-0.0
N.D.
+0.1
plant
Stem-Upstate
N.D.
-1.6
+0.7
N.D.
-0.6
plant
Stem-Atlantic
N.D.
-1.7
+0.3
N.D.
-0.0
stress
1.88mM_PTB
N.D.
-0.4
-0.1
N.D.
+1.3
stress
3.75mM_PTB
N.D.
-0.5
-0.1
N.D.
+1.7
stress
3.75mM_PTB
N.D.
-0.4
-0.3
N.D.
+1.9
stress
3.75mM_PTB
N.D.
-0.4
-0.2
N.D.
+1.8
stress
3.75mM_PTB
N.D.
-0.5
-0.0
N.D.
+1.9
control
PDB
N.D.
+0.5
+0.0
N.D.
+1.4
carbon source
M9+glycerol
N.D.
+0.9
-0.1
N.D.
+1.5
control
PDB
N.D.
+0.6
+0.2
N.D.
+1.5
carbon source
M9+glycerol
N.D.
+1.0
-0.3
N.D.
+1.5
control
PDB
N.D.
+0.7
+0.2
N.D.
+1.4
carbon source
M9+glycerol
N.D.
+0.8
+0.0
N.D.
+1.7
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DZA65_RS00985
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