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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS00835 and DZA65_RS00840 are separated by 226 nucleotides
DZA65_RS00840 and DZA65_RS00845 are separated by 99 nucleotides
DZA65_RS00845 and DZA65_RS00850 overlap by 1 nucleotides
DZA65_RS00850 and DZA65_RS00855 are separated by 118 nucleotides
DZA65_RS00835: DZA65_RS00835 - murein hydrolase activator EnvC, at 187,300 to 188,574
_RS00835
DZA65_RS00840: DZA65_RS00840 - rhodanese-like domain-containing protein, at 188,801 to 189,232
_RS00840
DZA65_RS00845: DZA65_RS00845 - protein-export chaperone SecB, at 189,332 to 189,802
_RS00845
DZA65_RS00850: DZA65_RS00850 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase, at 189,802 to 190,821
_RS00850
DZA65_RS00855: DZA65_RS00855 - serine O-acetyltransferase, at 190,940 to 191,761
_RS00855
Group
Condition
DZA65
_RS00835
DZA65
_RS00840
DZA65
_RS00845
DZA65
_RS00850
DZA65
_RS00855
plant
Atlantic
-1.1
-1.3
-1.1
N.D.
N.D.
plant
Upstate
-0.9
-0.8
-1.5
N.D.
N.D.
plant
Stem-Norland
-0.8
-0.5
-1.8
N.D.
N.D.
plant
Upstate
-0.7
-1.3
-0.8
N.D.
N.D.
plant
Upstate
-1.1
-1.1
-0.5
N.D.
N.D.
stress
3.75mM_PTB
-0.7
-0.7
-1.2
N.D.
N.D.
plant
Stem-Upstate
+0.1
-1.1
-1.6
N.D.
N.D.
plant
Atlantic
-0.7
-0.4
-1.4
N.D.
N.D.
plant
Stem-Upstate
-0.3
-0.7
-1.6
N.D.
N.D.
plant
Stem-Atlantic
-0.3
-0.6
-1.5
N.D.
N.D.
plant
Stem-Atlantic
-0.4
-0.7
-1.1
N.D.
N.D.
plant
Stem-Norland
-0.8
-0.9
-0.6
N.D.
N.D.
control
LB
-0.8
-0.4
-1.0
N.D.
N.D.
plant
Stem-Norland
-0.9
-0.5
-0.7
N.D.
N.D.
plant
Stem-Upstate
+0.3
-1.1
-1.2
N.D.
N.D.
plant
Stem-Norland
-0.3
-0.1
-1.7
N.D.
N.D.
plant
Stem-Upstate
-0.9
-0.1
-0.9
N.D.
N.D.
plant
Stem-Norland
+0.2
-0.2
-1.9
N.D.
N.D.
plant
Stem-Atlantic
+0.4
-1.1
-1.0
N.D.
N.D.
plant
Stem-Atlantic
-0.2
-1.2
-0.3
N.D.
N.D.
plant
Upstate
-0.8
-0.3
-0.4
N.D.
N.D.
stress
1.88mM_PTB
-0.4
-0.9
+0.5
N.D.
N.D.
plant
Stem-Upstate
+0.5
-0.6
-0.5
N.D.
N.D.
control
LB
-0.5
-0.6
+0.8
N.D.
N.D.
plant
Stem-Norland
+0.4
-1.1
+0.6
N.D.
N.D.
stress
1.88mM_PTB
-0.3
-0.8
+1.0
N.D.
N.D.
carbon source
M9+glycerol
+1.0
-0.6
-0.0
N.D.
N.D.
carbon source
M9+glycerol
+1.4
-0.5
-0.4
N.D.
N.D.
plant
Stem-Upstate
-0.1
-0.5
+1.1
N.D.
N.D.
carbon source
M9+glycerol
+1.8
+0.3
+0.6
N.D.
N.D.
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