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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS00590 and DZA65_RS00595 overlap by 1 nucleotides
DZA65_RS00595 and DZA65_RS00600 overlap by 4 nucleotides
DZA65_RS00600 and DZA65_RS00605 are separated by 0 nucleotides
DZA65_RS00605 and DZA65_RS00610 overlap by 1 nucleotides
DZA65_RS00590: DZA65_RS00590 - ABC transporter substrate-binding protein, at 136,707 to 138,302
_RS00590
DZA65_RS00595: DZA65_RS00595 - ABC transporter permease, at 138,302 to 139,312
_RS00595
DZA65_RS00600: DZA65_RS00600 - ABC transporter permease, at 139,309 to 140,211
_RS00600
DZA65_RS00605: DZA65_RS00605 - ABC transporter ATP-binding protein, at 140,212 to 141,039
_RS00605
DZA65_RS00610: DZA65_RS00610 - ABC transporter ATP-binding protein, at 141,039 to 141,779
_RS00610
Group
Condition
DZA65
_RS00590
DZA65
_RS00595
DZA65
_RS00600
DZA65
_RS00605
DZA65
_RS00610
plant
Atlantic
-0.0
-0.2
-0.4
-0.5
+0.0
plant
Stem-Norland
-0.1
-0.1
-0.4
-0.7
+0.4
control
LB
+0.1
+0.1
-0.3
-0.6
-0.1
plant
Stem-Norland
+0.1
-0.3
-0.3
-0.1
-0.1
control
LB
-0.2
-0.2
+0.0
-0.4
-0.1
plant
Stem-Norland
-0.1
-0.2
-0.1
-0.7
+0.3
carbon source
M9+glycerol
-0.0
-0.2
+0.2
-0.4
-0.0
plant
Norland
-0.0
-0.2
-0.4
+0.1
+0.2
plant
Stem-Atlantic
+0.1
-0.1
-0.6
+0.2
+0.3
plant
Stem-Atlantic
+0.2
-0.0
-0.4
+0.1
-0.1
plant
Norland
-0.0
-0.1
-0.2
-0.1
+0.3
plant
Upstate
+0.1
-0.3
+0.2
-0.3
+0.2
plant
Stem-Norland
-0.1
-0.3
+0.3
-0.2
+0.1
control
LB
+0.0
-0.1
+0.3
-0.3
+0.1
carbon source
M9+polygalacturonate
+0.2
+0.1
-0.4
+0.0
+0.3
stress
1.88mM_PTB
-0.1
+0.2
+0.3
-0.1
-0.1
carbon source
M9+starch
+0.1
-0.0
+0.2
-0.3
+0.1
plant
Atlantic
-0.2
+0.1
-0.1
+0.3
+0.1
carbon source
M9+polygalacturonate
+0.2
-0.3
+0.1
+0.2
+0.1
plant
Stem-Norland
-0.0
-0.3
+0.5
+0.3
-0.1
plant
Stem-Upstate
+0.3
-0.4
-0.4
+0.7
+0.1
plant
Stem-Upstate
+0.1
-0.0
-0.1
+0.3
+0.2
plant
Norland
-0.0
-0.3
+0.0
+0.4
+0.3
plant
Stem-Atlantic
+0.1
+0.1
-0.2
+0.3
+0.2
plant
Stem-Norland
+0.2
-0.2
-0.3
+0.7
+0.2
plant
Stem-Atlantic
-0.0
+0.2
+0.3
+0.2
-0.1
plant
Stem-Upstate
+0.2
-0.1
-0.1
+0.5
+0.3
plant
Stem-Upstate
-0.2
+0.3
+0.5
-0.1
+0.3
plant
Stem-Norland
+0.1
+0.3
+0.6
-0.1
+0.2
plant
Stem-Upstate
+0.4
+0.5
+0.5
+0.5
+0.4
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