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Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola ME23
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DZA65_RS00205 and DZA65_RS00210 are separated by 239 nucleotides
DZA65_RS00210 and DZA65_RS00215 are separated by 144 nucleotides
DZA65_RS00215 and DZA65_RS00220 are separated by 9 nucleotides
DZA65_RS00220 and DZA65_RS00225 are separated by 586 nucleotides
DZA65_RS00205: DZA65_RS00205 - DNA-3-methyladenine glycosylase I, at 47,219 to 47,779
_RS00205
DZA65_RS00210: DZA65_RS00210 - sulfite exporter TauE/SafE family protein, at 48,019 to 48,825
_RS00210
DZA65_RS00215: DZA65_RS00215 - glycine--tRNA ligase subunit alpha, at 48,970 to 49,884
_RS00215
DZA65_RS00220: DZA65_RS00220 - glycine--tRNA ligase subunit beta, at 49,894 to 51,978
_RS00220
DZA65_RS00225: DZA65_RS00225 - alpha/beta hydrolase, at 52,565 to 53,335
_RS00225
Group
Condition
DZA65
_RS00205
DZA65
_RS00210
DZA65
_RS00215
DZA65
_RS00220
DZA65
_RS00225
plant
Stem-Upstate
-1.1
-0.0
N.D.
N.D.
+0.4
plant
Stem-Upstate
-0.6
-0.2
N.D.
N.D.
+0.0
plant
Upstate
-0.4
-0.3
N.D.
N.D.
+0.1
stress
1.88mM_PTB
-0.4
-0.0
N.D.
N.D.
-0.1
control
LB
-0.2
-0.2
N.D.
N.D.
-0.1
carbon source
M9+sucrose
-0.4
-0.1
N.D.
N.D.
+0.0
plant
Stem-Upstate
-0.3
-0.0
N.D.
N.D.
-0.1
plant
Atlantic
-0.3
-0.1
N.D.
N.D.
-0.1
plant
Norland
-0.4
-0.0
N.D.
N.D.
-0.1
plant
Norland
-0.2
-0.2
N.D.
N.D.
-0.0
plant
Atlantic
-0.1
-0.2
N.D.
N.D.
-0.1
carbon source
M9+glycerol
-0.3
-0.1
N.D.
N.D.
+0.1
carbon source
M9+starch
-0.4
+0.0
N.D.
N.D.
+0.2
plant
Stem-Upstate
+0.5
-0.2
N.D.
N.D.
-0.3
plant
Upstate
-0.2
+0.1
N.D.
N.D.
+0.2
plant
Stem-Norland
+0.2
-0.3
N.D.
N.D.
+0.2
plant
Norland
-0.3
+0.0
N.D.
N.D.
+0.2
plant
Upstate
+0.3
-0.3
N.D.
N.D.
+0.0
plant
Stem-Atlantic
+0.3
-0.0
N.D.
N.D.
-0.2
carbon source
M9+glycerol
+0.2
+0.2
N.D.
N.D.
-0.2
plant
Stem-Norland
-0.1
+0.6
N.D.
N.D.
-0.2
plant
Stem-Norland
+0.3
+0.0
N.D.
N.D.
-0.1
plant
Atlantic
+0.1
-0.1
N.D.
N.D.
+0.2
plant
Stem-Norland
-0.1
+0.1
N.D.
N.D.
+0.3
plant
Stem-Norland
-0.1
+0.5
N.D.
N.D.
-0.0
plant
Stem-Norland
-0.1
+0.4
N.D.
N.D.
+0.1
plant
Stem-Norland
+0.2
-0.1
N.D.
N.D.
+0.3
plant
Stem-Atlantic
-0.0
+0.3
N.D.
N.D.
+0.2
plant
Stem-Atlantic
+0.4
+0.2
N.D.
N.D.
+0.1
plant
Stem-Norland
+0.7
+0.2
N.D.
N.D.
+0.1
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