Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS20380 and DDA3937_RS20385 are separated by 104 nucleotidesDDA3937_RS20385 and DDA3937_RS22535 overlap by 98 nucleotidesDDA3937_RS22535 and DDA3937_RS20395 are separated by 110 nucleotidesDDA3937_RS20395 and DDA3937_RS20400 are separated by 375 nucleotides DDA3937_RS20380: DDA3937_RS20380 - 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase, at 4,641,842 to 4,644,109 _RS20380 DDA3937_RS20385: DDA3937_RS20385 - HTH-type transcriptional regulator MetR, at 4,644,214 to 4,645,152 _RS20385 DDA3937_RS22535: DDA3937_RS22535 - DMT family transporter, at 4,645,055 to 4,645,954 _RS22535 DDA3937_RS20395: DDA3937_RS20395 - lipid IV(A) palmitoyltransferase PagP, at 4,646,065 to 4,646,667 _RS20395 DDA3937_RS20400: DDA3937_RS20400 - serine O-acetyltransferase, at 4,647,043 to 4,647,864 _RS20400
Group Condition DDA3937_RS20380 DDA3937_RS20385 DDA3937_RS22535 DDA3937_RS20395 DDA3937_RS20400
carbon source M9+polygalacturonate -1.3 -3.3 +0.0 -0.1 N.D.
carbon source M9+polygalacturonate -1.2 -3.2 +0.1 -0.0 N.D.
carbon source M9+polygalacturonate -1.1 -2.9 +0.1 -0.0 N.D.
carbon source M9+glycerol -0.4 -3.2 +0.2 +0.1 N.D.
carbon source M9+glycerol -0.4 -2.9 +0.0 -0.0 N.D.
carbon source M9+glycerol -0.5 -2.6 +0.0 -0.0 N.D.
carbon source M9+glucose -0.2 -2.4 -0.1 +0.1 N.D.
carbon source M9+sucrose -0.1 -2.8 +0.2 +0.1 N.D.
carbon source M9+sucrose -0.2 -2.4 +0.1 -0.0 N.D.
carbon source M9+glucose -0.2 -2.4 +0.1 +0.0 N.D.
carbon source M9+glycerol -0.4 -1.6 -0.1 -0.4 N.D.
carbon source M9+glycerol -0.2 -2.0 -0.1 -0.1 N.D.
control PDB -0.0 -0.5 -1.2 -0.6 N.D.
carbon source M9+glucose+arginine -0.0 -1.9 -0.0 -0.1 N.D.
carbon source M9+glucose+arginine -0.0 -2.0 +0.1 -0.1 N.D.
carbon source M9+starch -0.1 -2.1 +0.2 +0.1 N.D.
carbon source M9+glucose -0.1 -1.5 -0.2 -0.0 N.D.
carbon source M9+glucose+arginine +0.1 -1.9 -0.0 +0.1 N.D.
carbon source M9+starch -0.1 -2.1 +0.3 +0.2 N.D.
carbon source M9+starch -0.2 -1.9 +0.2 +0.3 N.D.
carbon source M9+sucrose -0.2 -1.8 +0.2 +0.1 N.D.
carbon source M9+glycerol -0.1 -1.5 +0.1 +0.0 N.D.
control PDB -0.2 -0.2 -0.5 -0.5 N.D.
stress 7.5mM_PTB +0.0 -0.3 -1.0 -0.1 N.D.
stress 7.5mM_PTB -0.0 +0.1 -1.0 -0.1 N.D.
control PDB -0.0 +0.4 -0.6 -0.3 N.D.
stress 7.5mM_PTB +0.1 -0.1 -0.7 +0.1 N.D.
plant Atlantic -0.1 -0.4 -0.4 +0.4 N.D.
control PDB +0.2 +0.0 -0.7 +0.1 N.D.
plant Upstate -0.2 +0.2 -0.5 +0.2 N.D.
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DDA3937_RS20380
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DDA3937_RS20385
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DDA3937_RS20395
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DDA3937_RS20400
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