Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS18855 and DDA3937_RS18860 are separated by 464 nucleotidesDDA3937_RS18860 and DDA3937_RS22485 overlap by 4 nucleotidesDDA3937_RS22485 and DDA3937_RS22490 are separated by 81 nucleotidesDDA3937_RS22490 and DDA3937_RS23355 are separated by 318 nucleotides DDA3937_RS18855: DDA3937_RS18855 - Fe-S cluster assembly protein NifU, at 4,307,293 to 4,308,120 _RS18855 DDA3937_RS18860: DDA3937_RS18860 - glycoside hydrolase family protein, at 4,308,585 to 4,309,388 _RS18860 DDA3937_RS22485: DDA3937_RS22485 - hypothetical protein, at 4,309,385 to 4,309,789 _RS22485 DDA3937_RS22490: DDA3937_RS22490 - Hcp family type VI secretion system effector, at 4,309,871 to 4,310,350 _RS22490 DDA3937_RS23355: DDA3937_RS23355 - hypothetical protein, at 4,310,669 to 4,311,031 _RS23355
Group Condition DDA3937_RS18855 DDA3937_RS18860 DDA3937_RS22485 DDA3937_RS22490 DDA3937_RS23355
plant Stem-Atlantic -0.1 -0.7 -1.6 -0.3 -0.8
control PDB +0.6 -0.0 -2.4 -0.5 -0.4
plant Upstate +0.1 -0.2 -2.1 -0.2 -0.4
control PDB -0.6 -0.2 -1.5 -0.3 -0.1
plant Norland +0.0 -0.3 -2.3 +0.0 +0.0
control PDB +0.1 -1.1 +0.6 -0.9 -0.6
control PDB -0.2 -0.8 +0.4 -0.0 -1.2
plant Norland +0.4 +0.0 -1.3 -0.3 -0.6
control PDB -0.8 -0.7 +0.3 -0.2 -0.4
carbon source M9+polygalacturonate -0.1 +0.1 -1.5 -0.3 +0.0
carbon source M9+starch -0.0 -0.0 -1.2 -0.3 -0.1
carbon source M9+glucose -0.2 -0.1 -0.8 -0.5 -0.1
carbon source M9+starch -0.3 -0.3 -0.6 -0.3 -0.1
plant Upstate -0.1 -0.2 -1.2 +0.0 -0.1
control PDB -0.2 -0.5 -0.4 -0.4 +0.0
plant Upstate -0.3 +0.2 -1.6 +0.1 +0.1
carbon source M9+sucrose -0.1 -0.0 -0.6 -0.4 -0.3
carbon source M9+glucose+arginine +0.0 -0.2 -1.2 -0.1 +0.1
plant Upstate +0.2 -0.2 -1.1 +0.1 -0.4
plant Atlantic +0.2 -0.2 -1.2 +0.1 -0.1
carbon source M9+glucose+arginine -0.2 -0.4 -0.6 -0.2 +0.4
plant Atlantic +0.6 +0.4 -1.7 -0.2 -0.2
carbon source M9+glycerol -0.3 +0.2 -1.1 -0.1 +0.3
plant Stem-Atlantic +0.6 +0.3 -1.6 +0.2 -0.2
plant Norland +0.3 +0.5 -1.2 -0.3 +0.0
plant Stem-Norland +0.0 -0.2 -0.9 +0.3 +0.2
plant Atlantic +0.2 -0.0 -0.9 -0.2 +0.5
plant Stem-Norland -0.0 -0.5 -0.6 +0.5 +0.3
plant Stem-Norland -0.3 -0.3 +0.5 -0.4 +0.6
plant Norland +1.2 -0.1 -0.1 +0.3 +0.3
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