Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS04425 and DDA3937_RS04430 are separated by 688 nucleotidesDDA3937_RS04430 and DDA3937_RS21675 are separated by 1 nucleotidesDDA3937_RS21675 and DDA3937_RS04440 are separated by 38 nucleotidesDDA3937_RS04440 and DDA3937_RS04445 are separated by 567 nucleotides DDA3937_RS04425: DDA3937_RS04425 - cysteine synthase CysM, at 976,922 to 977,803 _RS04425 DDA3937_RS04430: DDA3937_RS04430 - Hcp family type VI secretion system effector, at 978,492 to 978,971 _RS04430 DDA3937_RS21675: DDA3937_RS21675 - DUF4225 domain-containing protein, at 978,973 to 979,806 _RS21675 DDA3937_RS04440: DDA3937_RS04440 - hypothetical protein, at 979,845 to 980,234 _RS04440 DDA3937_RS04445: DDA3937_RS04445 - MacB family efflux pump subunit, at 980,802 to 982,748 _RS04445
Group Condition DDA3937_RS04425 DDA3937_RS04430 DDA3937_RS21675 DDA3937_RS04440 DDA3937_RS04445
carbon source M9+glucose+arginine -1.8 -0.4 -0.2 N.D. -0.1
control PDB +0.1 -0.6 -1.5 N.D. -0.3
control LB +0.0 -1.1 -1.2 N.D. +0.1
control PDB +0.6 -1.7 -0.8 N.D. -0.1
control PDB -0.2 -1.1 -0.6 N.D. -0.2
carbon source M9+glucose+arginine -1.2 +0.3 -1.2 N.D. +0.2
plant Upstate +0.1 -0.8 -0.6 N.D. -0.2
control PDB +0.7 -0.9 -1.3 N.D. +0.0
control LB -0.5 -0.7 -0.3 N.D. +0.1
control LB -0.5 -0.8 -0.4 N.D. +0.2
carbon source M9+glucose+arginine -1.7 +0.3 -0.1 N.D. +0.1
control LB -0.6 -0.5 -0.3 N.D. +0.0
stress 3.75mM_PTB -0.3 -0.7 -0.4 N.D. +0.2
carbon source M9+glucose -1.4 +0.3 -0.1 N.D. -0.1
plant Upstate +0.1 -0.7 -0.5 N.D. -0.0
plant Atlantic -0.4 -0.5 +0.2 N.D. -0.3
carbon source M9+glycerol +0.1 -1.2 +0.1 N.D. +0.0
carbon source M9+glycerol -0.3 -0.9 +0.0 N.D. +0.2
plant Stem-Norland -0.9 +0.4 -0.1 N.D. -0.2
plant Stem-Norland +0.6 -0.7 -0.2 N.D. -0.2
plant Atlantic -0.3 -0.6 +0.4 N.D. -0.1
carbon source M9+glucose -1.3 +0.4 +0.4 N.D. -0.0
plant Stem-Atlantic +0.1 -0.9 +0.4 N.D. -0.2
control PDB +0.6 -1.1 +0.3 N.D. -0.1
plant Norland +0.2 +0.5 -0.8 N.D. -0.0
plant Stem-Atlantic -0.3 -0.4 +0.5 N.D. +0.2
control PDB +0.6 +0.2 -0.5 N.D. -0.2
plant Norland -0.2 -0.5 +1.1 N.D. +0.3
plant Stem-Norland -0.5 +0.5 +0.7 N.D. +0.2
plant Upstate +0.2 +1.0 +0.1 N.D. -0.0
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DDA3937_RS04425
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DDA3937_RS04430
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DDA3937_RS04440
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DDA3937_RS04445
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