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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS21510 and DDA3937_RS21515 are separated by 78 nucleotides
DDA3937_RS21515 and DDA3937_RS21520 are separated by 4 nucleotides
DDA3937_RS21520 and DDA3937_RS21525 are separated by 72 nucleotides
DDA3937_RS21525 and DDA3937_RS21720 are separated by 27 nucleotides
DDA3937_RS21510: DDA3937_RS21510 - SUMF1/EgtB/PvdO family nonheme iron enzyme, at 4,899,876 to 4,900,826
_RS21510
DDA3937_RS21515: DDA3937_RS21515 - ATP-grasp domain-containing protein, at 4,900,905 to 4,902,071
_RS21515
DDA3937_RS21520: DDA3937_RS21520 - ATP-grasp domain-containing protein, at 4,902,076 to 4,903,284
_RS21520
DDA3937_RS21525: DDA3937_RS21525 - pyridoxal-phosphate dependent enzyme, at 4,903,357 to 4,904,349
_RS21525
DDA3937_RS21720: DDA3937_RS21720 - NAD(P)H-dependent oxidoreductase, at 4,904,377 to 4,904,916
_RS21720
Group
Condition
DDA3937
_RS21510
DDA3937
_RS21515
DDA3937
_RS21520
DDA3937
_RS21525
DDA3937
_RS21720
control
PDB
-0.1
-1.4
-0.1
-0.4
-0.7
control
PDB
-0.4
-0.6
-0.2
-0.1
-0.7
plant
Atlantic
-0.3
-0.7
-0.2
-0.2
-0.5
control
PDB
-0.3
-0.7
-0.3
-0.2
-0.2
carbon source
M9+starch
+0.0
-0.1
-0.2
-0.1
-0.9
plant
Stem-Norland
-0.0
-0.6
-0.0
-0.0
-0.6
carbon source
M9+glucose+arginine
-0.1
-0.3
-0.1
+0.0
-0.8
plant
Stem-Atlantic
+0.1
-0.7
-0.0
-0.4
-0.3
plant
Upstate
-0.2
-0.1
-0.1
-0.1
-0.7
control
PDB
-0.1
-0.8
+0.2
+0.1
-0.3
carbon source
M9+sucrose
-0.1
+0.0
-0.0
-0.2
-0.6
plant
Stem-Atlantic
+0.1
-0.2
+0.0
+0.0
-0.8
plant
Stem-Atlantic
-0.0
-0.1
-0.4
+0.1
-0.4
carbon source
M9+glucose+arginine
-0.0
+0.1
-0.2
-0.1
-0.5
control
LB
+0.1
-0.3
-0.1
-0.0
-0.4
plant
Stem-Norland
-0.1
-0.7
-0.2
-0.4
+0.6
plant
Stem-Atlantic
-0.1
-0.3
-0.2
+0.1
-0.2
carbon source
M9+glycerol
+0.1
-0.5
+0.1
-0.1
-0.3
plant
Stem-Norland
-0.6
-0.5
+0.2
-0.1
+0.5
plant
Norland
+0.0
-0.3
+0.2
-0.1
-0.4
plant
Norland
-0.3
-0.0
+0.1
+0.6
-0.8
control
LB
-0.1
-0.4
-0.2
+0.1
+0.2
control
PDB
-0.1
+0.3
+0.1
-0.1
-0.5
plant
Atlantic
+0.8
-0.3
+0.2
+0.0
-0.8
control
PDB
-0.5
+0.2
+0.1
-0.5
+0.6
plant
Stem-Norland
-0.2
+0.4
-0.4
+0.2
-0.0
carbon source
M9+glycerol
-0.0
-0.3
+0.1
-0.1
+0.5
carbon source
M9+glycerol
+0.3
+0.3
+0.1
-0.3
-0.3
plant
Norland
-0.2
-0.2
+0.5
+0.1
+0.1
plant
Atlantic
-0.2
+0.6
+0.0
+0.1
+0.4
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