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Protein
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Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS21360 and DDA3937_RS21365 overlap by 4 nucleotides
DDA3937_RS21365 and DDA3937_RS21370 overlap by 4 nucleotides
DDA3937_RS21370 and DDA3937_RS21375 overlap by 1 nucleotides
DDA3937_RS21375 and DDA3937_RS21380 overlap by 4 nucleotides
DDA3937_RS21360: DDA3937_RS21360 - 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase, at 4,864,498 to 4,864,896
_RS21360
DDA3937_RS21365: DDA3937_RS21365 - 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE, at 4,864,893 to 4,865,234
_RS21365
DDA3937_RS21370: DDA3937_RS21370 - lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase, at 4,865,231 to 4,866,889
_RS21370
DDA3937_RS21375: DDA3937_RS21375 - 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase, at 4,866,889 to 4,867,788
_RS21375
DDA3937_RS21380: DDA3937_RS21380 - bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA, at 4,867,785 to 4,869,776
_RS21380
Group
Condition
DDA3937
_RS21360
DDA3937
_RS21365
DDA3937
_RS21370
DDA3937
_RS21375
DDA3937
_RS21380
plant
Stem-Norland
N.D.
N.D.
-0.2
-3.7
-0.1
plant
Stem-Norland
N.D.
N.D.
-0.0
-3.5
-0.1
plant
Stem-Norland
N.D.
N.D.
-0.4
-2.7
-0.2
plant
Stem-Norland
N.D.
N.D.
-0.3
-2.6
-0.3
plant
Stem-Atlantic
N.D.
N.D.
+0.0
-2.9
-0.2
plant
Stem-Atlantic
N.D.
N.D.
-0.2
-2.7
+0.0
plant
Stem-Atlantic
N.D.
N.D.
+0.0
-2.5
-0.0
plant
Stem-Norland
N.D.
N.D.
+0.0
-2.0
-0.4
plant
Stem-Atlantic
N.D.
N.D.
+0.2
-2.6
+0.1
plant
Upstate
N.D.
N.D.
-0.3
-2.0
+0.1
plant
Norland
N.D.
N.D.
-0.4
-2.2
+0.4
plant
Stem-Atlantic
N.D.
N.D.
-0.0
-2.2
+0.2
plant
Upstate
N.D.
N.D.
+0.0
-1.9
+0.5
plant
Upstate
N.D.
N.D.
-0.3
-1.5
+0.5
plant
Atlantic
N.D.
N.D.
-0.3
-1.3
+0.4
plant
Norland
N.D.
N.D.
+0.1
-1.5
+0.3
plant
Norland
N.D.
N.D.
-0.2
-1.4
+0.5
plant
Atlantic
N.D.
N.D.
+0.1
-1.2
+0.6
control
PDB
N.D.
N.D.
+0.4
-1.3
+0.4
plant
Upstate
N.D.
N.D.
+0.4
-1.0
+0.4
plant
Norland
N.D.
N.D.
+0.5
-1.4
+0.8
carbon source
M9+glucose
N.D.
N.D.
+0.4
+1.1
+0.4
carbon source
M9+glucose+arginine
N.D.
N.D.
+0.4
+1.3
+0.3
carbon source
M9+glycerol
N.D.
N.D.
+0.7
+0.4
+0.9
carbon source
M9+glucose
N.D.
N.D.
+0.3
+1.5
+0.4
carbon source
M9+glucose+arginine
N.D.
N.D.
+0.4
+1.1
+0.6
carbon source
M9+glycerol
N.D.
N.D.
+0.7
+1.5
+0.3
carbon source
M9+glucose+arginine
N.D.
N.D.
+0.6
+1.5
+0.5
carbon source
M9+glycerol
N.D.
N.D.
+1.3
+1.1
+1.0
carbon source
M9+glycerol
N.D.
N.D.
+1.1
+1.4
+0.9
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