Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS21265 and DDA3937_RS21270 overlap by 4 nucleotidesDDA3937_RS21270 and DDA3937_RS21275 are separated by 194 nucleotidesDDA3937_RS21275 and DDA3937_RS21280 are separated by 78 nucleotidesDDA3937_RS21280 and DDA3937_RS21285 are separated by 17 nucleotides DDA3937_RS21265: DDA3937_RS21265 - oligopeptidase A, at 4,841,519 to 4,843,561 _RS21265 DDA3937_RS21270: DDA3937_RS21270 - 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ, at 4,843,558 to 4,844,310 _RS21270 DDA3937_RS21275: DDA3937_RS21275 - MFS transporter, at 4,844,505 to 4,845,689 _RS21275 DDA3937_RS21280: DDA3937_RS21280 - DNA topoisomerase (ATP-hydrolyzing) subunit B, at 4,845,768 to 4,848,179 _RS21280 DDA3937_RS21285: DDA3937_RS21285 - DNA replication/repair protein RecF, at 4,848,197 to 4,849,282 _RS21285
Group Condition DDA3937_RS21265 DDA3937_RS21270 DDA3937_RS21275 DDA3937_RS21280 DDA3937_RS21285
control PDB -2.2 -1.7 +0.2 N.D. +0.1
control PDB -2.3 -1.4 +0.0 N.D. +0.2
control PDB -2.3 -0.7 +0.2 N.D. -0.3
control PDB -2.5 -0.8 -0.1 N.D. +0.8
control PDB -2.3 -0.6 +0.1 N.D. +0.2
control PDB -2.1 -0.8 +0.2 N.D. +0.6
stress 7.5mM_PTB -0.9 -0.3 -0.1 N.D. -0.4
carbon source M9+glucose+arginine -0.8 +0.2 -0.4 N.D. -0.7
stress 7.5mM_PTB -0.9 -0.5 -0.0 N.D. -0.3
carbon source M9+glucose -0.6 -0.3 -0.2 N.D. -0.6
stress 7.5mM_PTB -0.8 -0.1 -0.1 N.D. -0.6
plant Stem-Norland -0.3 -0.4 +0.1 N.D. -0.9
plant Stem-Norland +0.2 -0.6 -0.5 N.D. -0.7
carbon source M9+glucose+arginine -0.7 +0.1 -0.2 N.D. -0.6
carbon source M9+glucose -0.5 +0.0 -0.2 N.D. -0.6
stress 3.75mM_PTB -0.7 +0.2 -0.2 N.D. -0.6
stress 7.5mM_PTB -1.0 +0.0 +0.1 N.D. -0.3
stress 3.75mM_PTB -0.6 -0.1 +0.1 N.D. -0.6
carbon source M9+starch -0.2 -0.3 -0.2 N.D. -0.4
carbon source M9+glucose+arginine -0.8 +0.1 -0.0 N.D. -0.5
carbon source M9+polygalacturonate -0.3 -0.1 -0.2 N.D. -0.5
plant Stem-Norland -0.1 -0.6 +0.1 N.D. -0.4
stress 1.88mM_PTB -0.4 +0.1 +0.1 N.D. -0.8
plant Stem-Atlantic +0.0 +0.1 +0.2 N.D. -1.2
stress 3.75mM_PTB -0.7 +0.3 -0.0 N.D. -0.4
stress 1.88mM_PTB -0.3 +0.2 -0.2 N.D. -0.6
carbon source M9+glycerol +0.5 -0.5 -0.3 N.D. -0.4
plant Stem-Atlantic +0.4 -0.4 -0.1 N.D. -0.3
plant Stem-Atlantic -0.1 +0.6 +0.1 N.D. -0.9
plant Upstate -0.3 +0.5 -0.0 N.D. +0.3
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DDA3937_RS21265
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DDA3937_RS21270
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DDA3937_RS21280
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DDA3937_RS21285
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