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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS20280 and DDA3937_RS20285 are separated by 49 nucleotides
DDA3937_RS20285 and DDA3937_RS20290 are separated by 213 nucleotides
DDA3937_RS20290 and DDA3937_RS20295 are separated by 31 nucleotides
DDA3937_RS20295 and DDA3937_RS20300 are separated by 2 nucleotides
DDA3937_RS20280: DDA3937_RS20280 - NAD(P)H-flavin reductase, at 4,619,549 to 4,620,250
_RS20280
DDA3937_RS20285: DDA3937_RS20285 - 4-hydroxy-3-polyprenylbenzoate decarboxylase, at 4,620,300 to 4,621,786
_RS20285
DDA3937_RS20290: DDA3937_RS20290 - transcription/translation regulatory transformer protein RfaH, at 4,622,000 to 4,622,488
_RS20290
DDA3937_RS20295: DDA3937_RS20295 - porphobilinogen synthase, at 4,622,520 to 4,623,542
_RS20295
DDA3937_RS20300: DDA3937_RS20300 - 3'-5' ssDNA/RNA exonuclease TatD, at 4,623,545 to 4,624,339
_RS20300
Group
Condition
DDA3937
_RS20280
DDA3937
_RS20285
DDA3937
_RS20290
DDA3937
_RS20295
DDA3937
_RS20300
plant
Stem-Norland
N.D.
N.D.
-0.9
N.D.
+0.1
plant
Stem-Atlantic
N.D.
N.D.
-1.0
N.D.
+0.4
plant
Upstate
N.D.
N.D.
+0.5
N.D.
-0.6
control
PDB
N.D.
N.D.
+0.6
N.D.
-0.4
stress
1.88mM_PTB
N.D.
N.D.
+0.9
N.D.
-0.2
plant
Norland
N.D.
N.D.
+0.9
N.D.
-0.2
stress
1.88mM_PTB
N.D.
N.D.
+0.9
N.D.
-0.1
stress
1.88mM_PTB
N.D.
N.D.
+0.9
N.D.
-0.1
control
PDB
N.D.
N.D.
+1.0
N.D.
-0.1
stress
3.75mM_PTB
N.D.
N.D.
+1.0
N.D.
-0.1
stress
3.75mM_PTB
N.D.
N.D.
+1.2
N.D.
-0.3
stress
3.75mM_PTB
N.D.
N.D.
+1.1
N.D.
-0.2
carbon source
M9+glycerol
N.D.
N.D.
+0.8
N.D.
+0.1
control
PDB
N.D.
N.D.
+1.0
N.D.
-0.0
stress
3.75mM_PTB
N.D.
N.D.
+1.1
N.D.
-0.1
carbon source
M9+glucose
N.D.
N.D.
+0.5
N.D.
+0.5
carbon source
M9+glycerol
N.D.
N.D.
+0.8
N.D.
+0.2
carbon source
M9+glucose
N.D.
N.D.
+0.9
N.D.
+0.2
carbon source
M9+glucose
N.D.
N.D.
+1.1
N.D.
+0.1
carbon source
M9+glucose+arginine
N.D.
N.D.
+1.0
N.D.
+0.2
carbon source
M9+glucose+arginine
N.D.
N.D.
+1.1
N.D.
+0.3
carbon source
M9+glycerol
N.D.
N.D.
+1.1
N.D.
+0.4
carbon source
M9+glycerol
N.D.
N.D.
+1.2
N.D.
+0.2
stress
7.5mM_PTB
N.D.
N.D.
+1.7
N.D.
-0.1
carbon source
M9+glycerol
N.D.
N.D.
+1.5
N.D.
+0.2
carbon source
M9+glycerol
N.D.
N.D.
+1.5
N.D.
+0.3
carbon source
M9+glucose+arginine
N.D.
N.D.
+1.5
N.D.
+0.3
stress
7.5mM_PTB
N.D.
N.D.
+2.1
N.D.
-0.2
stress
7.5mM_PTB
N.D.
N.D.
+2.3
N.D.
-0.0
stress
7.5mM_PTB
N.D.
N.D.
+2.4
N.D.
-0.0
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