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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS19010 and DDA3937_RS19015 are separated by 133 nucleotides
DDA3937_RS19015 and DDA3937_RS19020 are separated by 584 nucleotides
DDA3937_RS19020 and DDA3937_RS19025 are separated by 240 nucleotides
DDA3937_RS19025 and DDA3937_RS19030 are separated by 55 nucleotides
DDA3937_RS19010: DDA3937_RS19010 - beta-mannosidase, at 4,341,816 to 4,342,901
_RS19010
DDA3937_RS19015: DDA3937_RS19015 - glucose-6-phosphate isomerase, at 4,343,035 to 4,344,684
_RS19015
DDA3937_RS19020: DDA3937_RS19020 - lysine-sensitive aspartokinase 3, at 4,345,269 to 4,346,633
_RS19020
DDA3937_RS19025: DDA3937_RS19025 - conjugal transfer protein TraG, at 4,346,874 to 4,347,914
_RS19025
DDA3937_RS19030: DDA3937_RS19030 - Na/Pi cotransporter family protein, at 4,347,970 to 4,349,616
_RS19030
Group
Condition
DDA3937
_RS19010
DDA3937
_RS19015
DDA3937
_RS19020
DDA3937
_RS19025
DDA3937
_RS19030
carbon source
M9+starch
-0.0
-2.7
-0.1
+0.1
-0.9
carbon source
M9+starch
+0.1
-2.9
-0.0
+0.3
-0.7
carbon source
M9+starch
+0.1
-2.9
-0.2
+0.1
-0.3
plant
Upstate
+0.0
-2.8
-0.1
+0.0
+0.2
control
PDB
+0.1
-1.6
-0.1
+0.1
-1.0
plant
Upstate
+0.1
-2.8
-0.2
+0.2
+0.3
plant
Upstate
+0.1
-2.4
+0.2
+0.1
+0.1
plant
Norland
+0.2
-2.0
-0.2
+0.0
+0.1
plant
Upstate
+0.1
-2.3
-0.2
+0.0
+0.6
plant
Atlantic
+0.2
-1.6
+0.0
-0.4
-0.0
control
PDB
+0.2
-1.8
+0.4
-0.3
-0.4
control
PDB
+0.1
-1.2
-0.1
-0.4
-0.2
plant
Atlantic
+0.0
-1.4
-0.2
-0.0
-0.0
plant
Upstate
-0.1
-2.3
-0.2
+0.6
+0.4
plant
Atlantic
+0.1
-1.6
-0.2
+0.0
+0.1
plant
Norland
-0.0
-1.4
+0.3
-0.4
+0.1
carbon source
M9+glucose
-0.1
-1.9
+0.3
+0.1
+0.2
control
PDB
+0.2
-1.7
-0.2
+0.5
-0.1
plant
Norland
+0.0
-1.1
-0.3
-0.2
+0.2
plant
Norland
-0.2
-1.2
-0.3
-0.1
+0.6
plant
Upstate
+0.1
-1.7
-0.4
+0.2
+0.7
plant
Norland
+0.1
-1.1
-0.0
+0.4
-0.4
carbon source
M9+glucose
-0.0
-1.6
+0.4
+0.3
-0.1
control
PDB
+0.1
-1.1
-0.2
+0.0
+0.3
control
PDB
+0.1
-1.8
-0.0
+0.4
+0.5
plant
Atlantic
+0.2
-1.2
+0.2
+0.4
-0.4
plant
Atlantic
-0.1
-0.9
+0.3
+0.4
-0.3
carbon source
M9+glycerol
-0.1
-0.7
-0.4
-0.0
+0.6
carbon source
M9+glucose
+0.1
-1.2
+0.7
+0.1
+0.1
carbon source
M9+glucose+arginine
+0.0
-0.7
+0.9
+0.1
-0.3
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