Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS18845 and DDA3937_RS18850 are separated by 12 nucleotidesDDA3937_RS18850 and DDA3937_RS18855 are separated by 35 nucleotidesDDA3937_RS18855 and DDA3937_RS18860 are separated by 464 nucleotidesDDA3937_RS18860 and DDA3937_RS22485 overlap by 4 nucleotides DDA3937_RS18845: DDA3937_RS18845 - homocitrate synthase, at 4,304,852 to 4,306,000 _RS18845 DDA3937_RS18850: DDA3937_RS18850 - cysteine desulfurase NifS, at 4,306,013 to 4,307,257 _RS18850 DDA3937_RS18855: DDA3937_RS18855 - Fe-S cluster assembly protein NifU, at 4,307,293 to 4,308,120 _RS18855 DDA3937_RS18860: DDA3937_RS18860 - glycoside hydrolase family protein, at 4,308,585 to 4,309,388 _RS18860 DDA3937_RS22485: DDA3937_RS22485 - hypothetical protein, at 4,309,385 to 4,309,789 _RS22485
Group Condition DDA3937_RS18845 DDA3937_RS18850 DDA3937_RS18855 DDA3937_RS18860 DDA3937_RS22485
plant Norland +0.0 -0.2 +0.0 -0.3 -2.3
control PDB +0.1 -0.2 -0.6 -0.2 -1.5
plant Stem-Atlantic -0.1 +0.4 -0.1 -0.7 -1.6
plant Upstate +0.3 +0.0 +0.1 -0.2 -2.1
plant Stem-Norland -0.4 -0.2 -0.0 -0.5 -0.6
plant Upstate -0.0 -0.3 -0.1 -0.2 -1.2
carbon source M9+glucose+arginine -0.5 +0.1 -0.2 -0.4 -0.6
carbon source M9+glucose+arginine -0.3 +0.0 +0.0 -0.2 -1.2
carbon source M9+glucose -0.4 -0.1 -0.2 -0.1 -0.8
plant Stem-Atlantic -0.6 -0.2 +0.6 +0.3 -1.6
carbon source M9+glycerol -0.3 -0.0 -0.3 +0.2 -1.1
control PDB +0.4 +0.1 +0.6 -0.0 -2.4
carbon source M9+polygalacturonate -0.1 +0.2 -0.1 +0.1 -1.5
plant Upstate -0.0 -0.1 -0.0 +0.1 -1.3
carbon source M9+glycerol -0.5 -0.3 +0.1 +0.1 -0.6
plant Upstate +0.3 +0.3 -0.3 +0.2 -1.6
carbon source M9+starch +0.5 -0.2 -0.0 -0.0 -1.2
carbon source M9+polygalacturonate -0.3 +0.2 -0.3 +0.1 -0.7
plant Atlantic +0.2 -0.5 +0.6 +0.4 -1.7
plant Norland +0.3 -0.2 +0.4 +0.0 -1.3
control PDB +0.9 -0.2 -0.2 -0.5 -0.4
plant Norland -0.2 +0.2 +0.3 +0.5 -1.2
plant Atlantic +0.4 +0.4 +0.2 -0.2 -1.2
plant Upstate +0.4 +0.1 +0.2 -0.1 -0.9
control PDB +0.4 -0.1 -0.2 -0.8 +0.4
carbon source M9+glycerol -0.4 -0.4 -0.0 +0.3 +0.6
control PDB +0.5 +0.2 +0.1 -1.1 +0.6
control PDB +1.2 +0.4 -0.8 -0.7 +0.3
plant Atlantic +0.6 +0.6 +0.2 -0.0 -0.9
plant Norland -0.1 -0.1 +1.2 -0.1 -0.1
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