Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS18420 and DDA3937_RS18425 are separated by 562 nucleotidesDDA3937_RS18425 and DDA3937_RS18430 are separated by 97 nucleotidesDDA3937_RS18430 and DDA3937_RS18435 are separated by 205 nucleotidesDDA3937_RS18435 and DDA3937_RS18440 overlap by 4 nucleotides DDA3937_RS18420: DDA3937_RS18420 - tRNA/rRNA methyltransferase, at 4,209,622 to 4,210,323 _RS18420 DDA3937_RS18425: DDA3937_RS18425 - two-component system response regulator ArcA, at 4,210,886 to 4,211,602 _RS18425 DDA3937_RS18430: DDA3937_RS18430 - protein CreA, at 4,211,700 to 4,212,173 _RS18430 DDA3937_RS18435: DDA3937_RS18435 - MDR efflux pump AcrAB transcriptional activator RobA, at 4,212,379 to 4,213,245 _RS18435 DDA3937_RS18440: DDA3937_RS18440 - 2,3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB, at 4,213,242 to 4,213,892 _RS18440
Group Condition DDA3937_RS18420 DDA3937_RS18425 DDA3937_RS18430 DDA3937_RS18435 DDA3937_RS18440
plant Upstate -0.3 -0.9 -1.1 -0.6 +0.1
carbon source M9+polygalacturonate +0.0 -0.3 -1.4 -0.4 +0.1
carbon source M9+glycerol +0.1 -0.8 -0.2 -0.2 -0.8
plant Upstate -0.3 -1.0 -0.5 -0.3 +0.2
carbon source M9+glycerol +0.3 -0.7 -0.3 -0.1 -0.9
carbon source M9+glycerol +0.1 -0.6 -0.4 -0.1 -0.8
carbon source M9+glycerol +0.1 -0.6 -0.1 -0.0 -1.1
plant Atlantic +0.1 -0.9 -0.9 -0.1 +0.2
plant Atlantic -0.4 -1.2 -0.0 -0.1 +0.1
plant Upstate -0.3 -1.1 +0.1 -0.3 +0.0
plant Stem-Atlantic +0.1 -0.3 -0.9 -0.1 -0.2
carbon source M9+glycerol -0.3 -0.9 +0.1 -0.2 -0.1
plant Upstate -0.1 -1.3 +0.0 +0.1 -0.0
control PDB -0.2 -0.3 -1.1 +0.5 -0.2
plant Norland +0.0 -0.7 -0.6 -0.2 +0.2
control PDB -0.1 -1.1 -0.1 +0.3 -0.2
plant Stem-Atlantic +0.0 -0.4 -1.2 +0.1 +0.4
plant Stem-Norland +0.1 -0.5 -0.8 -0.1 +0.2
carbon source M9+sucrose +0.1 -0.2 -0.5 +0.2 -0.5
plant Stem-Norland +0.3 -0.3 -0.9 -0.2 +0.1
plant Norland -0.3 -0.8 +0.1 -0.1 +0.3
carbon source M9+sucrose -0.0 -0.4 +0.3 +0.2 -0.9
plant Stem-Norland +0.4 -0.6 -0.5 -0.2 +0.1
plant Upstate +0.1 -1.0 +0.3 -0.3 +0.2
plant Stem-Atlantic -0.1 -0.1 -1.0 -0.0 +0.4
control LB -0.0 -0.4 -0.2 -0.4 +0.4
control PDB -0.0 -0.6 -0.7 +0.4 +0.3
plant Norland -0.0 -0.6 +0.0 -0.4 +0.4
plant Stem-Norland +0.1 -0.1 -1.0 +0.3 +0.4
plant Norland +0.1 -1.1 +2.2 -0.2 -0.1
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