Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS17880 and DDA3937_RS17885 are separated by 101 nucleotidesDDA3937_RS17885 and DDA3937_RS17890 are separated by 359 nucleotidesDDA3937_RS17890 and DDA3937_RS17895 are separated by 69 nucleotidesDDA3937_RS17895 and DDA3937_RS17900 are separated by 250 nucleotides DDA3937_RS17880: DDA3937_RS17880 - YacL family protein, at 4,076,567 to 4,076,929 _RS17880 DDA3937_RS17885: DDA3937_RS17885 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase, at 4,077,031 to 4,079,628 _RS17885 DDA3937_RS17890: DDA3937_RS17890 - alpha/beta hydrolase, at 4,079,988 to 4,080,839 _RS17890 DDA3937_RS17895: DDA3937_RS17895 - TonB-dependent siderophore receptor, at 4,080,909 to 4,083,182 _RS17895 DDA3937_RS17900: DDA3937_RS17900 - helix-turn-helix transcriptional regulator, at 4,083,433 to 4,084,419 _RS17900
Group Condition DDA3937_RS17880 DDA3937_RS17885 DDA3937_RS17890 DDA3937_RS17895 DDA3937_RS17900
control PDB -1.2 N.D. +0.1 +0.1 -0.1
plant Stem-Norland -1.2 N.D. +0.2 -0.0 -0.1
control PDB +0.0 N.D. -0.1 +0.0 -0.8
plant Stem-Atlantic -0.6 N.D. +0.2 -0.1 +0.0
carbon source M9+glucose+arginine -0.4 N.D. -0.3 -0.0 +0.2
plant Upstate -0.2 N.D. -0.2 +0.1 -0.2
control LB -0.4 N.D. +0.1 -0.0 -0.1
stress 7.5mM_PTB -0.5 N.D. -0.0 -0.0 +0.1
plant Stem-Norland -0.6 N.D. +0.1 +0.2 -0.1
control PDB -0.6 N.D. -0.1 +0.1 +0.1
plant Stem-Norland -0.6 N.D. +0.2 +0.1 -0.1
plant Upstate +0.1 N.D. -0.4 +0.2 +0.0
stress 3.75mM_PTB -0.4 N.D. +0.0 -0.0 +0.2
carbon source M9+sucrose -0.3 N.D. -0.1 -0.0 +0.3
stress 7.5mM_PTB -0.4 N.D. +0.1 -0.0 +0.2
plant Atlantic -0.1 N.D. -0.3 +0.2 +0.4
plant Norland -0.2 N.D. +0.3 +0.1 +0.0
carbon source M9+glucose -0.1 N.D. -0.1 +0.0 +0.5
carbon source M9+starch -0.4 N.D. +0.3 +0.0 +0.5
carbon source M9+glycerol -0.1 N.D. +0.3 +0.1 +0.2
plant Stem-Atlantic +0.6 N.D. +0.5 -0.2 -0.4
plant Norland -0.6 N.D. -0.0 +0.5 +0.5
control PDB +0.4 N.D. -0.1 +0.1 +0.2
plant Atlantic +0.3 N.D. -0.1 +0.1 +0.2
plant Stem-Atlantic +0.2 N.D. +0.2 +0.1 +0.4
control PDB -0.5 N.D. +0.6 +0.2 +0.5
plant Atlantic +0.6 N.D. +0.6 -0.0 -0.0
plant Atlantic +0.0 N.D. +0.6 +0.2 +0.3
plant Norland +0.7 N.D. +0.2 +0.1 +0.2
plant Stem-Norland +0.9 N.D. +1.3 +0.1 +0.1
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DDA3937_RS17880
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DDA3937_RS17885
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DDA3937_RS17900
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