Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS17530 and DDA3937_RS17535 are separated by 370 nucleotidesDDA3937_RS17535 and DDA3937_RS17540 are separated by 250 nucleotidesDDA3937_RS17540 and DDA3937_RS17545 are separated by 48 nucleotidesDDA3937_RS17545 and DDA3937_RS17550 are separated by 1366 nucleotides DDA3937_RS17530: DDA3937_RS17530 - amino acid permease, at 3,985,943 to 3,987,316 _RS17530 DDA3937_RS17535: DDA3937_RS17535 - Lrp/AsnC family transcriptional regulator, at 3,987,687 to 3,988,163 _RS17535 DDA3937_RS17540: DDA3937_RS17540 - YitT family protein, at 3,988,414 to 3,989,028 _RS17540 DDA3937_RS17545: DDA3937_RS17545 - aspartate/tyrosine/aromatic aminotransferase, at 3,989,077 to 3,990,270 _RS17545 DDA3937_RS17550: DDA3937_RS17550 - type I-F CRISPR-associated endoribonuclease Cas6/Csy4, at 3,991,637 to 3,992,191 _RS17550
Group Condition DDA3937_RS17530 DDA3937_RS17535 DDA3937_RS17540 DDA3937_RS17545 DDA3937_RS17550
control PDB -0.3 -0.1 -0.5 -1.0 +0.1
control PDB +0.1 +0.2 -0.2 -2.0 +0.0
control PDB -0.3 -0.3 -0.3 -0.8 -0.2
control PDB +0.0 -0.6 -0.4 -0.8 +0.2
carbon source M9+glucose+arginine -0.1 +0.2 +0.1 -1.6 +0.0
carbon source M9+glucose+arginine +0.2 -0.2 -0.2 -1.3 +0.2
carbon source M9+glucose +0.0 -0.5 -0.2 -0.8 +0.2
control LB +0.1 -0.0 -0.0 -1.2 -0.1
plant Stem-Atlantic -0.1 +0.1 -0.1 -0.9 -0.2
control LB +0.2 -0.0 -0.1 -1.2 +0.0
plant Atlantic -0.0 -0.2 -0.2 -1.2 +0.7
control LB +0.1 +0.1 +0.1 -1.1 -0.1
plant Stem-Atlantic +0.1 -0.1 -0.2 -0.9 +0.2
carbon source M9+polygalacturonate -0.0 -0.3 -0.0 -0.8 +0.3
plant Atlantic -0.1 -0.1 +0.0 -0.9 +0.1
carbon source M9+sucrose +0.1 +0.1 -0.3 -0.7 +0.1
plant Norland +0.1 -0.0 -0.1 -1.0 +0.2
plant Stem-Norland -0.0 -0.6 +0.6 -0.5 -0.0
plant Stem-Atlantic -0.1 -0.3 +0.3 -0.7 +0.2
carbon source M9+glucose +0.1 -0.6 -0.0 -0.2 +0.3
plant Stem-Norland +0.0 +0.2 +0.4 -0.7 -0.4
carbon source M9+glycerol +0.2 -0.6 +0.2 -0.3 +0.1
plant Stem-Norland -0.0 +0.2 +0.3 -0.8 -0.0
carbon source M9+glucose -0.0 -0.2 -0.1 -0.5 +0.4
plant Stem-Atlantic -0.1 +0.1 +0.1 -0.9 +0.7
plant Norland +0.1 +0.2 +0.3 -0.6 +0.0
plant Upstate -0.0 +0.3 -0.3 -0.1 +0.4
plant Upstate +0.1 -0.2 +0.0 +0.9 +0.1
plant Atlantic +0.2 +0.3 -0.0 +1.0 -0.0
plant Norland +0.4 +1.0 +0.0 +0.3 -0.1
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