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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS17225 and DDA3937_RS17230 are separated by 5 nucleotides
DDA3937_RS17230 and DDA3937_RS17235 are separated by 221 nucleotides
DDA3937_RS17235 and DDA3937_RS17240 are separated by 227 nucleotides
DDA3937_RS17240 and DDA3937_RS17245 are separated by 138 nucleotides
DDA3937_RS17225: DDA3937_RS17225 - primosomal replication protein N, at 3,923,322 to 3,923,642
_RS17225
DDA3937_RS17230: DDA3937_RS17230 - 30S ribosomal protein S6, at 3,923,648 to 3,924,040
_RS17230
DDA3937_RS17235: DDA3937_RS17235 - esterase, at 3,924,262 to 3,925,011
_RS17235
DDA3937_RS17240: DDA3937_RS17240 - methyl-accepting chemotaxis protein, at 3,925,239 to 3,927,179
_RS17240
DDA3937_RS17245: DDA3937_RS17245 - biofilm peroxide resistance protein BsmA, at 3,927,318 to 3,927,722
_RS17245
Group
Condition
DDA3937
_RS17225
DDA3937
_RS17230
DDA3937
_RS17235
DDA3937
_RS17240
DDA3937
_RS17245
carbon source
M9+glucose
N.D.
N.D.
-0.8
-0.2
-0.0
carbon source
M9+glucose+arginine
N.D.
N.D.
-1.0
-0.0
+0.1
carbon source
M9+glucose+arginine
N.D.
N.D.
-0.9
+0.1
-0.1
control
PDB
N.D.
N.D.
-0.3
-0.3
-0.2
carbon source
M9+glucose+arginine
N.D.
N.D.
-0.7
+0.1
-0.1
control
PDB
N.D.
N.D.
-0.2
-0.3
-0.0
control
PDB
N.D.
N.D.
-0.4
-0.0
-0.1
plant
Atlantic
N.D.
N.D.
-0.4
+0.1
-0.1
control
PDB
N.D.
N.D.
-0.4
-0.3
+0.3
carbon source
M9+glucose
N.D.
N.D.
-0.4
+0.1
-0.0
carbon source
M9+glycerol
N.D.
N.D.
-0.1
-0.3
+0.1
plant
Upstate
N.D.
N.D.
-0.1
+0.2
-0.3
plant
Stem-Norland
N.D.
N.D.
-0.1
+0.1
-0.1
plant
Stem-Atlantic
N.D.
N.D.
-0.3
+0.1
+0.1
plant
Stem-Norland
N.D.
N.D.
+0.2
+0.2
-0.4
stress
7.5mM_PTB
N.D.
N.D.
-0.2
+0.1
+0.1
stress
7.5mM_PTB
N.D.
N.D.
-0.2
+0.2
+0.1
plant
Upstate
N.D.
N.D.
-0.1
+0.3
-0.1
plant
Stem-Norland
N.D.
N.D.
-0.1
-0.0
+0.3
plant
Stem-Norland
N.D.
N.D.
-0.2
+0.3
-0.0
plant
Atlantic
N.D.
N.D.
-0.2
+0.3
+0.0
stress
1.88mM_PTB
N.D.
N.D.
-0.1
+0.1
+0.3
carbon source
M9+polygalacturonate
N.D.
N.D.
+0.3
+0.1
+0.0
plant
Stem-Atlantic
N.D.
N.D.
+0.1
+0.3
+0.1
plant
Upstate
N.D.
N.D.
+0.1
+0.1
+0.3
plant
Upstate
N.D.
N.D.
+0.1
+0.1
+0.3
plant
Atlantic
N.D.
N.D.
-0.0
+0.4
+0.1
plant
Norland
N.D.
N.D.
+0.3
-0.0
+0.3
plant
Norland
N.D.
N.D.
+0.5
+0.1
+0.1
plant
Norland
N.D.
N.D.
+0.4
+0.1
+0.3
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DDA3937_RS17235
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