Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS17155 and DDA3937_RS17160 overlap by 4 nucleotidesDDA3937_RS17160 and DDA3937_RS17165 are separated by 383 nucleotidesDDA3937_RS17165 and DDA3937_RS17170 are separated by 295 nucleotidesDDA3937_RS17170 and DDA3937_RS17175 are separated by 96 nucleotides DDA3937_RS17155: DDA3937_RS17155 - translocation/assembly module TamB, at 3,906,953 to 3,910,708 _RS17155 DDA3937_RS17160: DDA3937_RS17160 - outer membrane protein assembly factor, at 3,910,705 to 3,912,441 _RS17160 DDA3937_RS17165: DDA3937_RS17165 - peptide-methionine (S)-S-oxide reductase MsrA, at 3,912,825 to 3,913,463 _RS17165 DDA3937_RS17170: DDA3937_RS17170 - HlyC/CorC family transporter, at 3,913,759 to 3,915,075 _RS17170 DDA3937_RS17175: DDA3937_RS17175 - DUF1107 domain-containing protein, at 3,915,172 to 3,915,378 _RS17175
Group Condition DDA3937_RS17155 DDA3937_RS17160 DDA3937_RS17165 DDA3937_RS17170 DDA3937_RS17175
control PDB -2.6 -2.5 +0.1 -0.4 -1.0
control PDB -2.1 -2.3 +0.0 -0.2 -0.5
control PDB -1.8 -2.3 +0.3 -0.5 -0.7
plant Upstate -2.0 -2.1 +0.0 -0.7 +0.0
control PDB -1.5 -1.4 -0.2 -0.6 -0.5
control PDB -1.6 -1.3 +0.2 -0.8 -0.7
plant Upstate -1.9 -1.8 -0.2 -0.4 +0.2
plant Atlantic -1.7 -1.8 +0.2 -0.6 +0.0
plant Upstate -2.1 -1.8 +0.3 -0.1 -0.1
plant Upstate -1.5 -1.6 +0.0 -0.6 -0.1
plant Atlantic -1.9 -1.1 -0.0 -0.5 -0.1
control LB -2.0 -1.5 +0.0 +0.1 -0.2
control PDB -1.5 -1.6 +0.1 +0.1 -0.8
plant Atlantic -1.7 -1.7 +0.1 -0.6 +0.3
plant Upstate -1.2 -1.8 +0.0 -0.5 +0.1
plant Upstate -1.6 -1.8 +0.1 -0.0 +0.0
control LB -1.5 -1.5 -0.0 -0.1 -0.2
plant Atlantic -1.6 -1.4 -0.2 -0.0 +0.0
plant Norland -1.1 -1.4 +0.1 -0.8 +0.1
plant Atlantic -1.3 -1.7 +0.1 -0.0 +0.1
plant Norland -1.4 -1.0 +0.3 -0.6 +0.0
plant Norland -1.3 -1.2 -0.1 +0.2 +0.1
plant Atlantic -0.7 -1.2 +0.0 -0.6 +0.4
stress 7.5mM_PTB -0.7 -0.9 +0.1 -0.4 -0.1
plant Norland -1.2 -0.9 +0.4 -0.0 +0.2
plant Norland -0.6 -1.2 +0.1 +0.3 +0.0
plant Norland -1.3 -0.9 +0.1 +0.7 +0.0
carbon source M9+glucose+arginine +0.6 +0.3 -0.3 -1.1 +0.3
carbon source M9+glucose+arginine +0.9 +0.6 -0.4 -0.8 +0.5
control LB +0.6 +0.5 -0.1 -0.2 +0.7
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