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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS16970 and DDA3937_RS16975 are separated by 204 nucleotides
DDA3937_RS16975 and DDA3937_RS16980 are separated by 70 nucleotides
DDA3937_RS16980 and DDA3937_RS16985 are separated by 79 nucleotides
DDA3937_RS16985 and DDA3937_RS16990 are separated by 295 nucleotides
DDA3937_RS16970: DDA3937_RS16970 - 7-carboxy-7-deazaguanine synthase QueE, at 3,858,183 to 3,858,854
_RS16970
DDA3937_RS16975: DDA3937_RS16975 - MBL fold metallo-hydrolase, at 3,859,059 to 3,860,033
_RS16975
DDA3937_RS16980: DDA3937_RS16980 - glycoside hydrolase family 88 protein, at 3,860,104 to 3,861,243
_RS16980
DDA3937_RS16985: DDA3937_RS16985 - MFS transporter, at 3,861,323 to 3,862,897
_RS16985
DDA3937_RS16990: DDA3937_RS16990 - ABC transporter substrate-binding protein, at 3,863,193 to 3,864,248
_RS16990
Group
Condition
DDA3937
_RS16970
DDA3937
_RS16975
DDA3937
_RS16980
DDA3937
_RS16985
DDA3937
_RS16990
control
PDB
-2.3
+0.5
-0.2
+0.0
-0.2
plant
Norland
-0.9
+0.0
-0.2
+0.0
-0.2
control
PDB
-1.1
+0.3
-0.1
-0.0
-0.2
plant
Stem-Norland
-0.4
-0.4
-0.1
+0.1
-0.0
plant
Stem-Norland
-0.5
-0.1
-0.1
+0.0
-0.2
control
PDB
-0.0
-0.4
-0.3
+0.1
-0.2
plant
Stem-Atlantic
-0.6
-0.1
-0.0
-0.0
+0.1
carbon source
M9+glycerol
-0.4
-0.3
-0.0
+0.1
+0.1
carbon source
M9+glycerol
-0.6
+0.0
+0.1
-0.1
-0.0
plant
Norland
-0.9
+0.1
+0.2
+0.2
+0.0
plant
Upstate
-0.6
+0.2
-0.0
+0.0
-0.0
control
PDB
-0.8
+0.4
+0.3
-0.0
+0.0
plant
Upstate
-0.2
+0.3
+0.2
-0.1
-0.1
plant
Atlantic
-0.1
+0.5
-0.2
+0.0
-0.1
plant
Norland
-0.1
+0.4
-0.1
+0.0
-0.1
control
PDB
-0.2
+0.4
+0.2
-0.0
-0.1
stress
7.5mM_PTB
+0.5
-0.2
+0.1
+0.0
+0.1
stress
1.88mM_PTB
+0.3
+0.2
+0.2
+0.0
-0.1
plant
Stem-Atlantic
+0.4
+0.1
+0.2
-0.0
-0.2
plant
Atlantic
-0.4
+0.5
+0.3
+0.1
+0.1
carbon source
M9+glycerol
+0.6
-0.0
-0.0
+0.0
+0.1
plant
Stem-Atlantic
+1.0
-0.6
+0.2
+0.0
+0.1
stress
7.5mM_PTB
+0.6
-0.0
+0.2
+0.0
-0.0
carbon source
M9+glycerol
+0.8
+0.3
-0.1
+0.1
-0.3
carbon source
M9+sucrose
+0.5
+0.2
+0.1
+0.0
+0.0
plant
Norland
-0.5
+0.3
+0.5
+0.3
+0.3
plant
Atlantic
+0.7
-0.0
+0.2
+0.1
-0.0
plant
Stem-Atlantic
+1.2
-0.7
+0.4
-0.0
+0.1
carbon source
M9+glucose+arginine
+0.8
+0.3
+0.1
-0.1
-0.0
plant
Atlantic
+0.1
+0.5
+0.1
+0.2
+0.4
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