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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS16755 and DDA3937_RS16760 are separated by 174 nucleotides
DDA3937_RS16760 and DDA3937_RS16765 are separated by 17 nucleotides
DDA3937_RS16765 and DDA3937_RS16770 are separated by 85 nucleotides
DDA3937_RS16770 and DDA3937_RS16775 are separated by 511 nucleotides
DDA3937_RS16755: DDA3937_RS16755 - transcriptional repressor MprA, at 3,811,842 to 3,812,354
_RS16755
DDA3937_RS16760: DDA3937_RS16760 - multidrug efflux MFS transporter periplasmic adaptor subunit EmrA, at 3,812,529 to 3,813,704
_RS16760
DDA3937_RS16765: DDA3937_RS16765 - multidrug efflux MFS transporter permease subunit EmrB, at 3,813,722 to 3,815,254
_RS16765
DDA3937_RS16770: DDA3937_RS16770 - tRNA/rRNA methyltransferase, at 3,815,340 to 3,816,428
_RS16770
DDA3937_RS16775: DDA3937_RS16775 - thioredoxin TrxC, at 3,816,940 to 3,817,365
_RS16775
Group
Condition
DDA3937
_RS16755
DDA3937
_RS16760
DDA3937
_RS16765
DDA3937
_RS16770
DDA3937
_RS16775
plant
Stem-Norland
+0.2
-2.4
-2.1
-1.0
+0.0
carbon source
M9+glucose
-2.1
-0.4
-0.0
-0.7
+0.0
carbon source
M9+glucose
-2.2
-0.5
-0.0
-0.4
+0.0
carbon source
M9+glucose
-2.2
-0.5
+0.1
-0.4
+0.1
plant
Stem-Norland
+0.8
-1.7
-1.7
-0.4
+0.1
plant
Stem-Atlantic
+0.6
-1.7
-1.8
-0.0
+0.2
carbon source
M9+sucrose
-1.5
-0.6
-0.3
-0.4
+0.2
control
PDB
-0.2
-0.4
-0.8
-0.9
-0.2
plant
Stem-Atlantic
+0.3
-1.7
-1.7
+0.7
-0.1
carbon source
M9+glucose+arginine
-1.7
-0.4
+0.3
-0.6
-0.1
plant
Stem-Atlantic
+0.4
-2.1
-1.1
+0.1
+0.3
carbon source
M9+sucrose
-1.4
-0.3
-0.2
-0.2
+0.1
plant
Stem-Atlantic
+0.4
-1.4
-1.5
+0.4
+0.1
carbon source
M9+sucrose
-1.2
-0.6
-0.1
-0.2
+0.1
plant
Stem-Norland
+0.4
-1.7
-1.4
+0.7
+0.2
control
PDB
+0.2
-0.7
-1.1
-0.2
+0.1
plant
Stem-Norland
+1.6
-1.6
-1.4
-0.2
-0.2
plant
Upstate
-1.2
-0.1
-0.4
+0.4
+0.0
control
PDB
+0.1
-0.7
-1.0
+0.6
-0.3
plant
Stem-Norland
+1.3
-1.2
-1.0
+0.1
-0.3
plant
Norland
-0.7
-0.4
-0.4
-0.1
+0.5
carbon source
M9+glycerol
-1.7
+0.0
-0.1
+1.1
-0.1
plant
Norland
-1.1
-0.2
-0.3
+0.7
+0.0
control
PDB
-0.0
-0.6
-0.8
+0.4
+0.4
control
PDB
+0.3
-0.7
-0.3
-0.3
+0.4
plant
Stem-Atlantic
+0.9
-0.8
-1.1
+0.6
-0.1
carbon source
M9+glycerol
-1.4
+0.3
+0.0
+0.3
+0.3
carbon source
M9+glucose+arginine
-0.7
+0.3
+0.4
-0.5
+0.1
carbon source
M9+glycerol
-1.1
+0.2
+0.1
+1.0
+0.1
plant
Upstate
-0.2
-0.3
-0.2
+1.3
-0.0
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DDA3937_RS16765
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