Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS16130 and DDA3937_RS16135 are separated by 110 nucleotidesDDA3937_RS16135 and DDA3937_RS16140 are separated by 12 nucleotidesDDA3937_RS16140 and DDA3937_RS16145 are separated by 641 nucleotidesDDA3937_RS16145 and DDA3937_RS16150 are separated by 365 nucleotides DDA3937_RS16130: DDA3937_RS16130 - bifunctional chorismate mutase/prephenate dehydratase, at 3,683,666 to 3,684,823 _RS16130 DDA3937_RS16135: DDA3937_RS16135 - bifunctional chorismate mutase/prephenate dehydrogenase, at 3,684,934 to 3,686,055 _RS16135 DDA3937_RS16140: DDA3937_RS16140 - 3-deoxy-7-phosphoheptulonate synthase, at 3,686,068 to 3,687,132 _RS16140 DDA3937_RS16145: DDA3937_RS16145 - DUF2799 domain-containing protein, at 3,687,774 to 3,688,151 _RS16145 DDA3937_RS16150: DDA3937_RS16150 - class I SAM-dependent methyltransferase, at 3,688,517 to 3,689,467 _RS16150
Group Condition DDA3937_RS16130 DDA3937_RS16135 DDA3937_RS16140 DDA3937_RS16145 DDA3937_RS16150
carbon source M9+glucose -4.1 N.D. N.D. -0.1 +0.1
carbon source M9+polygalacturonate -3.9 N.D. N.D. -0.1 +0.0
carbon source M9+sucrose -3.7 N.D. N.D. -0.1 -0.1
carbon source M9+glucose -3.9 N.D. N.D. +0.0 +0.0
carbon source M9+glucose+arginine -3.4 N.D. N.D. -0.3 -0.1
carbon source M9+starch -3.5 N.D. N.D. -0.2 +0.0
carbon source M9+glucose -3.6 N.D. N.D. -0.1 +0.0
carbon source M9+sucrose -3.6 N.D. N.D. -0.2 +0.1
carbon source M9+starch -3.3 N.D. N.D. -0.2 -0.1
carbon source M9+starch -3.4 N.D. N.D. -0.1 -0.1
carbon source M9+polygalacturonate -3.5 N.D. N.D. +0.0 -0.1
carbon source M9+sucrose -3.4 N.D. N.D. +0.1 -0.0
carbon source M9+polygalacturonate -3.2 N.D. N.D. -0.0 -0.1
carbon source M9+glucose+arginine -3.6 N.D. N.D. +0.2 +0.1
carbon source M9+glucose+arginine -3.1 N.D. N.D. -0.1 +0.2
plant Stem-Norland -1.8 N.D. N.D. -0.3 +0.1
plant Atlantic -2.0 N.D. N.D. +0.4 -0.1
plant Norland -1.8 N.D. N.D. +0.2 -0.1
control PDB -0.2 N.D. N.D. -1.1 -0.2
plant Stem-Norland -1.5 N.D. N.D. +0.0 -0.0
plant Norland -1.0 N.D. N.D. -0.1 -0.2
plant Atlantic -1.7 N.D. N.D. +0.6 -0.2
plant Norland -1.2 N.D. N.D. -0.2 +0.1
control PDB -0.2 N.D. N.D. -0.6 -0.5
control PDB -0.4 N.D. N.D. -0.9 +0.1
plant Stem-Norland -1.4 N.D. N.D. +0.1 +0.1
plant Norland -1.0 N.D. N.D. +0.0 -0.1
plant Stem-Norland -1.0 N.D. N.D. -0.4 +0.4
carbon source M9+glycerol +0.8 N.D. N.D. -0.3 -0.2
carbon source M9+glycerol +1.3 N.D. N.D. -0.3 +0.1
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DDA3937_RS16130
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DDA3937_RS16135
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DDA3937_RS16150
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