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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS16090 and DDA3937_RS16095 are separated by 87 nucleotides
DDA3937_RS16095 and DDA3937_RS16100 are separated by 455 nucleotides
DDA3937_RS16100 and DDA3937_RS16105 are separated by 135 nucleotides
DDA3937_RS16105 and DDA3937_RS16110 are separated by 19 nucleotides
DDA3937_RS16090: DDA3937_RS16090 - tRNA-Glu, at 3,675,200 to 3,675,275
_RS16090
DDA3937_RS16095: DDA3937_RS16095 - 16S ribosomal RNA, at 3,675,363 to 3,676,904
_RS16095
DDA3937_RS16100: DDA3937_RS16100 - ATP-dependent chaperone ClpB, at 3,677,360 to 3,679,933
_RS16100
DDA3937_RS16105: DDA3937_RS16105 - polyphenol oxidase, at 3,680,069 to 3,680,794
_RS16105
DDA3937_RS16110: DDA3937_RS16110 - 23S rRNA pseudouridine(1911/1915/1917) synthase RluD, at 3,680,814 to 3,681,791
_RS16110
Group
Condition
DDA3937
_RS16090
DDA3937
_RS16095
DDA3937
_RS16100
DDA3937
_RS16105
DDA3937
_RS16110
plant
Stem-Atlantic
N.D.
-0.9
+0.0
-1.3
-2.0
plant
Stem-Norland
N.D.
-0.5
-0.1
-1.1
-2.4
plant
Stem-Norland
N.D.
-1.1
-0.3
-0.6
-2.1
carbon source
M9+glucose+arginine
N.D.
-1.3
-0.1
+0.3
-2.8
plant
Stem-Atlantic
N.D.
-0.5
+0.2
-1.8
-1.7
carbon source
M9+glucose+arginine
N.D.
-2.0
-0.0
+0.9
-2.7
carbon source
M9+glucose
N.D.
-1.5
+0.2
+1.0
-3.3
plant
Stem-Norland
N.D.
-0.1
+0.2
-1.1
-2.5
plant
Stem-Atlantic
N.D.
-0.8
+0.0
-1.2
-1.4
plant
Upstate
N.D.
-1.3
+0.0
-0.8
-1.1
stress
7.5mM_PTB
N.D.
-0.6
-0.2
-1.2
-1.1
plant
Norland
N.D.
-0.8
-0.1
-0.9
-1.1
carbon source
M9+glucose
N.D.
-0.4
-0.1
+0.9
-3.3
plant
Atlantic
N.D.
-1.1
-0.1
-0.4
-1.3
plant
Upstate
N.D.
-0.7
+0.0
-0.8
-1.3
plant
Stem-Norland
N.D.
-0.1
-0.1
-0.8
-1.8
carbon source
M9+glucose
N.D.
-0.6
-0.0
+0.9
-3.0
plant
Stem-Norland
N.D.
-0.2
+0.3
-0.2
-2.4
plant
Norland
N.D.
-1.2
+0.3
-0.7
-0.9
plant
Atlantic
N.D.
-1.1
+0.3
-0.6
-1.0
plant
Stem-Atlantic
N.D.
+0.4
+0.1
-0.9
-1.8
plant
Stem-Atlantic
N.D.
+0.7
+0.3
-1.2
-2.1
carbon source
M9+glucose+arginine
N.D.
-0.6
-0.0
+1.4
-3.0
plant
Norland
N.D.
-0.7
+0.5
-1.0
-0.9
carbon source
M9+glycerol
N.D.
-0.7
-0.2
+0.5
+1.6
carbon source
M9+glycerol
N.D.
-1.1
-0.2
-0.1
+2.7
carbon source
M9+glycerol
N.D.
-0.9
-0.1
+0.1
+3.1
carbon source
M9+glycerol
N.D.
-0.5
-0.1
-0.3
+3.1
carbon source
M9+glycerol
N.D.
-1.3
-0.3
+0.8
+3.7
carbon source
M9+glycerol
N.D.
-0.0
-0.3
+0.6
+3.5
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