Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS15965 and DDA3937_RS15970 are separated by 69 nucleotidesDDA3937_RS15970 and DDA3937_RS15975 overlap by 4 nucleotidesDDA3937_RS15975 and DDA3937_RS15980 are separated by 126 nucleotidesDDA3937_RS15980 and DDA3937_RS15985 are separated by 44 nucleotides DDA3937_RS15965: DDA3937_RS15965 - aspartate 1-decarboxylase, at 3,652,309 to 3,652,689 _RS15965 DDA3937_RS15970: DDA3937_RS15970 - ABC transporter permease, at 3,652,759 to 3,653,529 _RS15970 DDA3937_RS15975: DDA3937_RS15975 - ABC transporter ATP-binding protein, at 3,653,526 to 3,654,449 _RS15975 DDA3937_RS15980: DDA3937_RS15980 - carbonate dehydratase, at 3,654,576 to 3,655,217 _RS15980 DDA3937_RS15985: DDA3937_RS15985 - hypoxanthine phosphoribosyltransferase, at 3,655,262 to 3,655,792 _RS15985
Group Condition DDA3937_RS15965 DDA3937_RS15970 DDA3937_RS15975 DDA3937_RS15980 DDA3937_RS15985
carbon source M9+glycerol -2.9 -0.2 -0.3 N.D. -0.4
carbon source M9+sucrose -3.5 -0.0 +0.1 N.D. +0.2
carbon source M9+glycerol -2.8 -0.1 -0.3 N.D. -0.1
carbon source M9+sucrose -3.5 -0.1 +0.3 N.D. +0.0
carbon source M9+glycerol -3.0 -0.1 +0.1 N.D. -0.2
carbon source M9+sucrose -3.3 +0.1 +0.0 N.D. +0.1
carbon source M9+glycerol -3.2 +0.0 -0.2 N.D. +0.2
carbon source M9+glucose -3.5 +0.2 -0.0 N.D. +0.2
carbon source M9+glucose -3.1 -0.1 +0.1 N.D. +0.5
carbon source M9+glucose+arginine -3.1 +0.4 +0.4 N.D. -0.1
carbon source M9+glycerol -1.4 -0.5 -0.2 N.D. -0.4
carbon source M9+glucose -2.9 +0.2 +0.4 N.D. +0.2
carbon source M9+glucose+arginine -2.7 +0.3 +0.1 N.D. +0.1
carbon source M9+glucose+arginine -3.0 +0.4 +0.4 N.D. +0.1
carbon source M9+polygalacturonate -2.2 +0.1 -0.2 N.D. +0.3
carbon source M9+starch -1.8 -0.0 -0.1 N.D. +0.0
carbon source M9+polygalacturonate -2.4 +0.1 +0.2 N.D. +0.3
carbon source M9+starch -1.9 +0.0 +0.1 N.D. +0.1
carbon source M9+polygalacturonate -2.1 +0.1 +0.3 N.D. +0.3
carbon source M9+glycerol -1.2 -0.1 -0.3 N.D. +0.4
carbon source M9+starch -2.0 +0.2 +0.0 N.D. +0.6
plant Stem-Atlantic +0.2 +0.1 -0.7 N.D. +0.5
plant Upstate -0.1 +0.5 -0.2 N.D. +0.9
plant Atlantic +0.2 +0.2 +0.4 N.D. +0.8
control PDB +0.0 -0.4 -0.4 N.D. +2.9
control PDB +0.1 -0.1 -0.7 N.D. +3.1
control PDB +0.2 -0.1 -0.8 N.D. +3.3
control PDB +0.6 -0.3 -0.1 N.D. +2.9
control PDB +0.2 -0.1 +0.0 N.D. +3.4
control PDB +0.2 -0.2 +0.4 N.D. +3.2
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