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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS15865 and DDA3937_RS15870 are separated by 551 nucleotides
DDA3937_RS15870 and DDA3937_RS15875 are separated by 59 nucleotides
DDA3937_RS15875 and DDA3937_RS15880 are separated by 302 nucleotides
DDA3937_RS15880 and DDA3937_RS15885 are separated by 118 nucleotides
DDA3937_RS15865: DDA3937_RS15865 - dGTPase, at 3,627,967 to 3,629,484
_RS15865
DDA3937_RS15870: DDA3937_RS15870 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, at 3,630,036 to 3,630,737
_RS15870
DDA3937_RS15875: DDA3937_RS15875 - vitamin B12 ABC transporter substrate-binding protein BtuF, at 3,630,797 to 3,631,615
_RS15875
DDA3937_RS15880: DDA3937_RS15880 - IS110-like element ISEch4 family transposase, at 3,631,918 to 3,632,922
_RS15880
DDA3937_RS15885: DDA3937_RS15885 - iron-sulfur cluster insertion protein ErpA, at 3,633,041 to 3,633,385
_RS15885
Group
Condition
DDA3937
_RS15865
DDA3937
_RS15870
DDA3937
_RS15875
DDA3937
_RS15880
DDA3937
_RS15885
carbon source
M9+glycerol
-0.8
N.D.
-0.0
N.D.
N.D.
carbon source
M9+glycerol
-1.0
N.D.
+0.2
N.D.
N.D.
carbon source
M9+glycerol
-0.6
N.D.
-0.2
N.D.
N.D.
plant
Norland
-0.7
N.D.
+0.0
N.D.
N.D.
control
PDB
+0.1
N.D.
-0.8
N.D.
N.D.
plant
Norland
-0.3
N.D.
-0.3
N.D.
N.D.
plant
Atlantic
-0.4
N.D.
-0.2
N.D.
N.D.
carbon source
M9+glycerol
-0.4
N.D.
-0.1
N.D.
N.D.
plant
Upstate
-0.3
N.D.
-0.3
N.D.
N.D.
plant
Norland
-0.3
N.D.
-0.2
N.D.
N.D.
plant
Norland
-0.2
N.D.
-0.3
N.D.
N.D.
plant
Norland
-0.1
N.D.
-0.3
N.D.
N.D.
plant
Atlantic
-0.2
N.D.
-0.2
N.D.
N.D.
plant
Upstate
-0.1
N.D.
-0.3
N.D.
N.D.
carbon source
M9+glucose+arginine
-0.0
N.D.
-0.3
N.D.
N.D.
plant
Atlantic
-0.3
N.D.
-0.0
N.D.
N.D.
plant
Stem-Norland
+0.1
N.D.
-0.3
N.D.
N.D.
carbon source
M9+glucose
+0.2
N.D.
-0.3
N.D.
N.D.
plant
Atlantic
+0.1
N.D.
-0.2
N.D.
N.D.
plant
Norland
-0.4
N.D.
+0.2
N.D.
N.D.
carbon source
M9+glycerol
-0.2
N.D.
+0.1
N.D.
N.D.
plant
Stem-Atlantic
+0.2
N.D.
-0.2
N.D.
N.D.
plant
Atlantic
-0.2
N.D.
+0.5
N.D.
N.D.
control
LB
+0.0
N.D.
+0.3
N.D.
N.D.
carbon source
M9+polygalacturonate
+0.2
N.D.
+0.1
N.D.
N.D.
control
PDB
-0.1
N.D.
+0.4
N.D.
N.D.
control
PDB
+0.3
N.D.
+0.1
N.D.
N.D.
plant
Stem-Norland
+0.1
N.D.
+0.4
N.D.
N.D.
control
PDB
+0.0
N.D.
+0.4
N.D.
N.D.
plant
Atlantic
+0.0
N.D.
+0.4
N.D.
N.D.
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