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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS15820 and DDA3937_RS15825 are separated by 7 nucleotides
DDA3937_RS15825 and DDA3937_RS15830 are separated by 316 nucleotides
DDA3937_RS15830 and DDA3937_RS15835 are separated by 48 nucleotides
DDA3937_RS15835 and DDA3937_RS15840 overlap by 11 nucleotides
DDA3937_RS15820: DDA3937_RS15820 - tRNA-Val, at 3,619,932 to 3,620,007
_RS15820
DDA3937_RS15825: DDA3937_RS15825 - tRNA-Lys, at 3,620,015 to 3,620,090
_RS15825
DDA3937_RS15830: DDA3937_RS15830 - DoxX family protein, at 3,620,407 to 3,620,841
_RS15830
DDA3937_RS15835: DDA3937_RS15835 - sulfate ABC transporter ATP-binding protein, at 3,620,890 to 3,621,882
_RS15835
DDA3937_RS15840: DDA3937_RS15840 - sulfate ABC transporter permease subunit CysW, at 3,621,872 to 3,622,756
_RS15840
Group
Condition
DDA3937
_RS15820
DDA3937
_RS15825
DDA3937
_RS15830
DDA3937
_RS15835
DDA3937
_RS15840
carbon source
M9+glucose+arginine
N.D.
N.D.
-0.0
-3.1
-2.7
carbon source
M9+glucose+arginine
N.D.
N.D.
-0.3
-2.4
-2.5
carbon source
M9+glucose
N.D.
N.D.
-0.1
-2.3
-2.5
carbon source
M9+glucose
N.D.
N.D.
-0.3
-2.1
-2.4
carbon source
M9+glucose+arginine
N.D.
N.D.
-0.1
-2.4
-2.4
carbon source
M9+glucose
N.D.
N.D.
-0.2
-2.3
-2.3
carbon source
M9+sucrose
N.D.
N.D.
-0.1
-1.0
-1.0
carbon source
M9+polygalacturonate
N.D.
N.D.
-0.0
-1.0
-0.9
carbon source
M9+sucrose
N.D.
N.D.
-0.2
-0.8
-0.9
carbon source
M9+sucrose
N.D.
N.D.
-0.3
-0.7
-0.8
stress
7.5mM_PTB
N.D.
N.D.
-0.2
-0.6
-0.7
carbon source
M9+polygalacturonate
N.D.
N.D.
+0.0
-0.8
-0.6
carbon source
M9+polygalacturonate
N.D.
N.D.
-0.1
-0.7
-0.6
stress
7.5mM_PTB
N.D.
N.D.
-0.1
-0.5
-0.6
stress
7.5mM_PTB
N.D.
N.D.
-0.1
-0.5
-0.6
stress
7.5mM_PTB
N.D.
N.D.
-0.0
-0.4
-0.5
plant
Stem-Atlantic
N.D.
N.D.
-0.2
-0.4
-0.3
stress
3.75mM_PTB
N.D.
N.D.
-0.1
-0.3
-0.5
plant
Stem-Norland
N.D.
N.D.
-0.8
-0.1
+0.1
carbon source
M9+starch
N.D.
N.D.
-0.1
-0.3
-0.3
plant
Stem-Atlantic
N.D.
N.D.
-0.0
-0.5
-0.3
plant
Stem-Atlantic
N.D.
N.D.
-0.2
-0.2
-0.3
stress
3.75mM_PTB
N.D.
N.D.
-0.0
-0.2
-0.4
control
PDB
N.D.
N.D.
+0.1
-0.0
-0.6
plant
Stem-Norland
N.D.
N.D.
+0.2
+0.1
-0.5
control
PDB
N.D.
N.D.
-0.1
+0.3
+0.4
control
LB
N.D.
N.D.
-0.0
+0.3
+0.4
control
LB
N.D.
N.D.
+0.0
+0.4
+0.3
plant
Upstate
N.D.
N.D.
+0.2
+0.4
+0.3
plant
Norland
N.D.
N.D.
+0.7
+0.6
+0.2
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