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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS15610 and DDA3937_RS15615 are separated by 454 nucleotides
DDA3937_RS15615 and DDA3937_RS15620 are separated by 519 nucleotides
DDA3937_RS15620 and DDA3937_RS15625 are separated by 78 nucleotides
DDA3937_RS15625 and DDA3937_RS15630 are separated by 83 nucleotides
DDA3937_RS15610: DDA3937_RS15610 - polysaccharide lyase, at 3,573,869 to 3,575,047
_RS15610
DDA3937_RS15615: DDA3937_RS15615 - polysaccharide lyase, at 3,575,502 to 3,576,716
_RS15615
DDA3937_RS15620: DDA3937_RS15620 - polysaccharide lyase, at 3,577,236 to 3,578,414
_RS15620
DDA3937_RS15625: DDA3937_RS15625 - pectin acetylesterase, at 3,578,493 to 3,580,148
_RS15625
DDA3937_RS15630: DDA3937_RS15630 - pectinesterase A, at 3,580,232 to 3,581,332
_RS15630
Group
Condition
DDA3937
_RS15610
DDA3937
_RS15615
DDA3937
_RS15620
DDA3937
_RS15625
DDA3937
_RS15630
control
PDB
-0.2
-0.0
+0.0
-0.1
-0.5
carbon source
M9+glucose+arginine
+0.1
-0.1
-0.2
-0.2
-0.1
control
PDB
-0.1
-0.2
+0.0
+0.1
-0.2
carbon source
M9+glycerol
-0.0
-0.1
-0.3
+0.1
-0.1
plant
Stem-Norland
-0.2
+0.1
-0.3
+0.0
+0.1
control
PDB
-0.1
-0.5
+0.2
+0.0
+0.1
plant
Stem-Atlantic
-0.2
-0.1
-0.1
+0.1
+0.1
plant
Stem-Norland
-0.2
+0.0
-0.4
+0.2
+0.2
carbon source
M9+polygalacturonate
+0.1
-0.2
+0.1
+0.0
-0.2
plant
Stem-Norland
+0.0
-0.2
+0.3
+0.0
-0.1
plant
Atlantic
+0.2
-0.2
-0.1
+0.1
-0.0
plant
Norland
+0.3
-0.1
-0.0
-0.2
-0.1
plant
Stem-Atlantic
+0.2
-0.1
+0.1
-0.2
-0.0
carbon source
M9+glucose+arginine
-0.0
+0.3
+0.1
-0.1
-0.1
carbon source
M9+starch
+0.1
+0.2
-0.2
+0.0
-0.1
plant
Stem-Norland
+0.2
-0.1
+0.1
-0.1
+0.2
control
PDB
-0.1
+0.0
+0.2
+0.3
-0.2
plant
Norland
+0.2
-0.0
-0.2
-0.0
+0.2
plant
Upstate
+0.1
-0.2
+0.1
+0.0
+0.1
plant
Stem-Norland
+0.2
-0.2
-0.2
+0.2
+0.2
plant
Upstate
+0.2
+0.2
-0.0
+0.0
-0.1
plant
Norland
+0.1
-0.3
+0.2
-0.0
+0.3
plant
Norland
+0.2
+0.2
-0.1
+0.0
+0.1
control
PDB
+0.2
-0.3
+0.3
+0.0
+0.1
plant
Stem-Atlantic
+0.2
-0.2
+0.0
+0.2
+0.3
control
LB
+0.1
+0.2
+0.1
-0.1
+0.1
plant
Atlantic
+0.2
-0.0
+0.2
+0.0
+0.0
plant
Norland
+0.1
+0.1
+0.2
-0.1
+0.2
carbon source
M9+glycerol
+0.2
+0.1
+0.1
+0.1
+0.3
plant
Atlantic
+0.1
+0.0
+0.2
+0.1
+0.2
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