Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS15450 and DDA3937_RS15455 are separated by 10 nucleotidesDDA3937_RS15455 and DDA3937_RS15460 are separated by 13 nucleotidesDDA3937_RS15460 and DDA3937_RS15465 are separated by 152 nucleotidesDDA3937_RS15465 and DDA3937_RS15470 are separated by 36 nucleotides DDA3937_RS15450: DDA3937_RS15450 - outer membrane protein assembly factor BamB, at 3,542,083 to 3,543,264 _RS15450 DDA3937_RS15455: DDA3937_RS15455 - YfgM family protein, at 3,543,275 to 3,543,895 _RS15455 DDA3937_RS15460: DDA3937_RS15460 - histidine--tRNA ligase, at 3,543,909 to 3,545,183 _RS15460 DDA3937_RS15465: DDA3937_RS15465 - flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase, at 3,545,336 to 3,546,457 _RS15465 DDA3937_RS15470: DDA3937_RS15470 - cytoskeleton protein RodZ, at 3,546,494 to 3,547,495 _RS15470
Group Condition DDA3937_RS15450 DDA3937_RS15455 DDA3937_RS15460 DDA3937_RS15465 DDA3937_RS15470
plant Stem-Norland -0.7 -0.7 N.D. N.D. -2.6
plant Upstate -1.9 -0.3 N.D. N.D. -0.6
carbon source M9+glucose+arginine -0.7 -0.7 N.D. N.D. -1.1
carbon source M9+glycerol -0.9 -0.8 N.D. N.D. -0.7
plant Upstate -1.0 -0.2 N.D. N.D. -0.5
carbon source M9+glycerol -0.6 -0.3 N.D. N.D. -0.6
control PDB -1.0 -1.3 N.D. N.D. +0.8
plant Stem-Atlantic -1.8 +0.3 N.D. N.D. +0.1
plant Stem-Norland -1.8 +0.5 N.D. N.D. -0.1
plant Stem-Atlantic -2.0 +1.5 N.D. N.D. -0.8
plant Stem-Atlantic -0.7 +0.2 N.D. N.D. -0.6
plant Stem-Norland -0.8 +0.3 N.D. N.D. -0.5
control PDB -1.8 -0.1 N.D. N.D. +0.9
plant Norland -1.3 -0.0 N.D. N.D. +0.4
plant Norland +0.7 -0.3 N.D. N.D. -1.1
plant Atlantic -0.2 -1.0 N.D. N.D. +0.7
plant Norland -0.7 +0.8 N.D. N.D. -0.6
control LB -0.9 +0.2 N.D. N.D. +0.7
plant Upstate -1.1 +1.3 N.D. N.D. -0.2
plant Norland -0.7 +0.5 N.D. N.D. +0.4
carbon source M9+glucose+arginine -0.3 -0.3 N.D. N.D. +1.1
plant Atlantic -0.8 +1.4 N.D. N.D. +0.2
stress 7.5mM_PTB -0.4 +0.8 N.D. N.D. +0.4
plant Atlantic -0.7 +1.4 N.D. N.D. +0.2
control PDB -0.9 +0.7 N.D. N.D. +1.3
plant Upstate -0.7 +1.5 N.D. N.D. +0.3
carbon source M9+starch -0.2 +0.3 N.D. N.D. +1.1
control PDB +0.1 -0.1 N.D. N.D. +1.4
plant Stem-Atlantic -1.2 +0.9 N.D. N.D. +1.8
plant Atlantic +0.9 +1.8 N.D. N.D. +1.0
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