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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS14955 and DDA3937_RS14960 are separated by 102 nucleotides
DDA3937_RS14960 and DDA3937_RS14965 are separated by 268 nucleotides
DDA3937_RS14965 and DDA3937_RS14970 are separated by 15 nucleotides
DDA3937_RS14970 and DDA3937_RS14975 are separated by 408 nucleotides
DDA3937_RS14955: DDA3937_RS14955 - pectate lyase, at 3,430,875 to 3,431,909
_RS14955
DDA3937_RS14960: DDA3937_RS14960 - iron-containing alcohol dehydrogenase family protein, at 3,432,012 to 3,433,100
_RS14960
DDA3937_RS14965: DDA3937_RS14965 - D-galactonate dehydratase family protein, at 3,433,369 to 3,434,583
_RS14965
DDA3937_RS14970: DDA3937_RS14970 - Zn-dependent oxidoreductase, at 3,434,599 to 3,435,621
_RS14970
DDA3937_RS14975: DDA3937_RS14975 - MHS family MFS transporter, at 3,436,030 to 3,437,451
_RS14975
Group
Condition
DDA3937
_RS14955
DDA3937
_RS14960
DDA3937
_RS14965
DDA3937
_RS14970
DDA3937
_RS14975
plant
Stem-Norland
-0.3
+0.1
+0.1
-0.3
-0.2
plant
Stem-Norland
-0.3
+0.2
+0.0
-0.3
-0.1
plant
Norland
-0.5
+0.2
-0.1
+0.1
-0.2
plant
Stem-Atlantic
-0.1
-0.5
-0.0
+0.4
-0.1
plant
Atlantic
+0.1
+0.2
-0.2
-0.2
-0.2
carbon source
M9+sucrose
-0.2
+0.2
+0.2
-0.2
-0.2
plant
Stem-Norland
-0.1
+0.1
+0.4
-0.4
-0.2
plant
Upstate
-0.2
+0.2
+0.2
-0.2
+0.0
control
PDB
+0.4
-0.5
+0.2
-0.0
-0.1
control
PDB
+0.3
-0.5
+0.2
+0.1
-0.0
carbon source
M9+glycerol
+0.2
-0.7
+0.1
+0.3
+0.2
plant
Norland
-0.1
+0.3
+0.2
+0.0
-0.2
plant
Norland
-0.4
-0.1
+0.4
-0.1
+0.4
plant
Norland
-0.4
+0.1
-0.1
+0.1
+0.5
control
LB
+0.2
+0.1
+0.1
+0.3
-0.2
carbon source
M9+glucose+arginine
+0.1
+0.5
-0.0
-0.4
+0.1
carbon source
M9+glycerol
+0.4
-0.2
+0.1
-0.1
+0.2
plant
Upstate
-0.2
+0.3
+0.0
+0.3
+0.2
stress
7.5mM_PTB
+0.4
+0.3
-0.1
+0.0
+0.0
control
LB
+0.4
-0.1
+0.3
+0.1
+0.1
plant
Stem-Atlantic
+0.0
+0.5
-0.1
+0.3
-0.1
carbon source
M9+glycerol
+0.2
+0.6
+0.3
-0.3
-0.1
stress
7.5mM_PTB
+0.4
+0.3
-0.0
-0.0
-0.0
control
PDB
+0.3
-0.0
+0.4
-0.0
+0.1
stress
7.5mM_PTB
+0.4
+0.3
-0.1
+0.0
+0.0
plant
Upstate
+0.1
+0.5
+0.2
-0.0
+0.1
control
LB
+0.4
+0.3
+0.1
+0.1
+0.1
plant
Stem-Norland
+0.5
-0.1
+0.2
+0.3
+0.2
plant
Stem-Atlantic
+0.3
+0.4
+0.3
+0.4
-0.3
plant
Atlantic
+0.7
+0.0
+0.1
+0.2
+0.1
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DDA3937_RS14965
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