Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS14585 and DDA3937_RS14590 are separated by 295 nucleotidesDDA3937_RS14590 and DDA3937_RS14595 are separated by 101 nucleotidesDDA3937_RS14595 and DDA3937_RS14600 are separated by 882 nucleotidesDDA3937_RS14600 and DDA3937_RS14605 overlap by 4 nucleotides DDA3937_RS14585: DDA3937_RS14585 - 50S ribosomal protein L3 N(5)-glutamine methyltransferase, at 3,337,712 to 3,338,644 _RS14585 DDA3937_RS14590: DDA3937_RS14590 - endonuclease SmrB, at 3,338,940 to 3,339,482 _RS14590 DDA3937_RS14595: DDA3937_RS14595 - phosphohistidine phosphatase SixA, at 3,339,584 to 3,340,069 _RS14595 DDA3937_RS14600: DDA3937_RS14600 - fatty acid oxidation complex subunit alpha FadJ, at 3,340,952 to 3,343,144 _RS14600 DDA3937_RS14605: DDA3937_RS14605 - acetyl-CoA C-acyltransferase FadI, at 3,343,141 to 3,344,475 _RS14605
Group Condition DDA3937_RS14585 DDA3937_RS14590 DDA3937_RS14595 DDA3937_RS14600 DDA3937_RS14605
control PDB -1.8 -0.0 -1.4 -0.2 +0.0
control PDB +0.4 -0.4 -3.2 +0.3 +0.3
control PDB -0.4 -0.7 -1.9 +0.5 -0.1
control PDB -0.5 -1.0 -0.9 -0.0 +0.5
control PDB +0.5 -0.6 -2.2 +0.4 +0.3
carbon source M9+starch +0.3 -0.0 -1.8 -0.2 +0.2
carbon source M9+glycerol -0.7 -0.1 -0.8 +0.2 +0.1
carbon source M9+starch +0.1 -0.1 -1.5 +0.1 +0.1
control PDB +0.2 -0.5 -0.9 -0.2 +0.2
control LB -0.1 -0.0 -0.8 -0.1 -0.2
plant Stem-Atlantic -0.8 -0.2 -0.0 -0.1 +0.0
plant Stem-Norland -0.6 -0.0 -0.4 +0.0 -0.1
carbon source M9+starch -0.1 +0.0 -0.8 -0.2 +0.0
stress 7.5mM_PTB -0.8 +0.1 -0.5 +0.1 +0.0
carbon source M9+glucose+arginine -1.1 -0.4 +0.4 +0.1 +0.2
control LB +0.3 -0.2 -0.8 -0.2 -0.0
carbon source M9+glucose+arginine -1.6 -0.3 +0.8 +0.2 +0.1
control LB +0.2 -0.0 -0.7 -0.2 -0.0
plant Upstate -1.0 +0.2 +0.0 +0.2 -0.1
plant Stem-Norland -0.3 -0.4 -0.1 +0.3 -0.1
plant Norland -0.8 -0.1 +0.5 +0.2 -0.0
control LB -0.3 +0.1 -0.4 +0.2 +0.2
plant Norland -0.5 +0.5 +0.0 +0.1 -0.2
carbon source M9+glucose -0.4 -0.2 +0.6 +0.1 +0.2
plant Atlantic -0.4 -0.1 +0.8 +0.3 -0.0
carbon source M9+glucose -0.0 -0.6 +1.0 +0.2 +0.3
plant Stem-Atlantic -0.5 +0.4 +0.4 +0.3 +0.3
carbon source M9+glucose+arginine +0.2 -0.3 +0.8 -0.0 +0.2
carbon source M9+glucose +0.6 -0.3 +0.8 -0.0 +0.2
plant Norland +1.3 +0.4 -0.3 -0.0 -0.0
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