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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS14170 and DDA3937_RS14175 are separated by 15 nucleotides
DDA3937_RS14175 and DDA3937_RS14180 are separated by 793 nucleotides
DDA3937_RS14180 and DDA3937_RS14185 are separated by 11 nucleotides
DDA3937_RS14185 and DDA3937_RS14190 are separated by 124 nucleotides
DDA3937_RS14170: DDA3937_RS14170 - formate dehydrogenase subunit beta, at 3,244,096 to 3,244,998
_RS14170
DDA3937_RS14175: DDA3937_RS14175 - formate dehydrogenase-N subunit alpha, at 3,245,014 to 3,248,064
_RS14175
DDA3937_RS14180: DDA3937_RS14180 - PLP-dependent aminotransferase family protein, at 3,248,858 to 3,250,279
_RS14180
DDA3937_RS14185: DDA3937_RS14185 - glutamine amidotransferase, at 3,250,291 to 3,251,016
_RS14185
DDA3937_RS14190: DDA3937_RS14190 - hypothetical protein, at 3,251,141 to 3,251,617
_RS14190
Group
Condition
DDA3937
_RS14170
DDA3937
_RS14175
DDA3937
_RS14180
DDA3937
_RS14185
DDA3937
_RS14190
plant
Stem-Norland
-0.4
+0.4
+0.4
-1.1
-0.5
carbon source
M9+polygalacturonate
-0.2
-0.1
-0.2
-0.5
-0.2
carbon source
M9+polygalacturonate
-0.2
-0.1
-0.1
-0.5
-0.1
carbon source
M9+starch
+0.0
-0.0
+0.1
-0.4
-0.4
plant
Stem-Norland
-0.3
+0.2
+0.3
-0.4
-0.2
carbon source
M9+starch
-0.2
+0.1
+0.1
-0.2
-0.3
plant
Atlantic
+0.2
+0.1
+0.1
-0.4
-0.3
plant
Norland
+0.1
+0.1
-0.3
+0.2
-0.2
plant
Stem-Atlantic
+0.0
+0.0
+0.0
-0.6
+0.4
plant
Norland
-0.1
+0.2
+0.2
+0.6
-0.1
carbon source
M9+sucrose
+0.2
+0.0
+0.1
+0.4
-0.2
plant
Stem-Atlantic
-0.3
+0.2
-0.0
+0.6
+0.3
carbon source
M9+glycerol
+0.1
+0.0
-0.0
+0.8
+0.0
plant
Atlantic
+0.0
-0.0
+0.2
+0.1
+0.5
carbon source
M9+glycerol
+0.1
+0.1
+0.1
+0.7
-0.0
plant
Atlantic
-0.2
+0.2
+0.3
+0.4
+0.2
carbon source
M9+glycerol
+0.2
-0.1
+0.2
+0.6
-0.0
plant
Atlantic
+0.5
+0.1
+0.2
+0.2
-0.1
carbon source
M9+glycerol
+0.1
-0.0
+0.2
+0.9
-0.1
plant
Atlantic
+0.1
+0.2
+0.2
+0.6
+0.1
control
PDB
+1.2
+1.1
+0.4
-1.5
-0.0
control
PDB
+0.8
+0.9
-0.0
-0.4
+0.0
carbon source
M9+glycerol
+0.2
+0.1
+0.3
+0.9
+0.1
plant
Upstate
+0.2
+0.0
+0.2
+0.5
+0.6
carbon source
M9+glycerol
+0.4
-0.0
+0.3
+1.0
-0.1
control
PDB
+1.1
+0.9
+0.1
+0.1
-0.6
control
PDB
+1.3
+0.9
+0.2
-0.7
+0.1
control
PDB
+0.9
+0.9
-0.3
+0.6
-0.4
plant
Stem-Atlantic
+0.5
+0.2
+0.3
+0.2
+0.5
control
PDB
+1.1
+1.2
+0.1
+0.4
-0.5
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DDA3937_RS14180
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