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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS23275 and DDA3937_RS14075 are separated by 244 nucleotides
DDA3937_RS14075 and DDA3937_RS14080 are separated by 45 nucleotides
DDA3937_RS14080 and DDA3937_RS14085 are separated by 27 nucleotides
DDA3937_RS14085 and DDA3937_RS14090 overlap by 4 nucleotides
DDA3937_RS23275: DDA3937_RS23275 - hypothetical protein, at 3,215,100 to 3,215,363
_RS23275
DDA3937_RS14075: DDA3937_RS14075 - NAD(P)H-dependent oxidoreductase, at 3,215,608 to 3,216,153
_RS14075
DDA3937_RS14080: DDA3937_RS14080 - uroporphyrinogen-III C-methyltransferase, at 3,216,199 to 3,217,029
_RS14080
DDA3937_RS14085: DDA3937_RS14085 - nitrate reductase, at 3,217,057 to 3,219,711
_RS14085
DDA3937_RS14090: DDA3937_RS14090 - nitrite reductase small subunit NirD, at 3,219,708 to 3,223,883
_RS14090
Group
Condition
DDA3937
_RS23275
DDA3937
_RS14075
DDA3937
_RS14080
DDA3937
_RS14085
DDA3937
_RS14090
carbon source
M9+glycerol
-0.5
-0.3
-0.1
-0.0
+0.0
plant
Stem-Norland
-0.0
-0.4
-0.1
-0.2
+0.1
plant
Atlantic
-0.2
-0.1
-0.2
+0.1
+0.1
plant
Atlantic
-0.2
-0.0
+0.3
-0.1
-0.2
carbon source
M9+glycerol
-0.3
+0.2
-0.0
-0.1
+0.0
plant
Stem-Norland
+0.1
-0.2
+0.1
-0.2
+0.1
carbon source
M9+starch
-0.1
+0.2
+0.2
-0.2
-0.0
plant
Stem-Atlantic
+0.3
+0.1
-0.2
-0.3
+0.2
plant
Norland
-0.1
+0.3
-0.2
-0.0
+0.2
plant
Upstate
-0.1
+0.0
+0.4
-0.1
-0.1
carbon source
M9+glucose+arginine
-0.3
+0.2
+0.1
+0.1
+0.0
plant
Atlantic
-0.1
+0.6
-0.1
+0.1
-0.1
carbon source
M9+glucose+arginine
-0.2
+0.3
+0.3
-0.2
+0.1
control
PDB
-0.2
+0.1
+0.2
+0.4
+0.0
control
PDB
-0.1
+0.0
+0.5
+0.1
-0.0
plant
Upstate
-0.1
+0.2
+0.3
+0.2
+0.0
control
PDB
+0.0
+0.1
-0.1
+0.3
+0.3
control
LB
+0.3
+0.1
+0.2
-0.1
+0.1
plant
Stem-Atlantic
-0.2
+0.2
+0.5
-0.0
+0.1
stress
1.88mM_PTB
+0.3
+0.1
+0.3
-0.1
+0.1
plant
Stem-Norland
-0.0
+0.3
+0.3
-0.0
+0.2
stress
3.75mM_PTB
+0.2
+0.1
+0.4
+0.0
-0.0
plant
Norland
+0.1
+0.0
+0.4
+0.1
-0.0
plant
Stem-Norland
-0.3
+0.3
+0.4
+0.1
+0.2
control
PDB
-0.0
+0.3
+0.1
+0.3
+0.2
plant
Norland
+0.2
+0.4
+0.4
-0.1
+0.1
plant
Norland
-0.0
+0.7
+0.4
-0.1
-0.0
control
PDB
+0.1
-0.2
+0.8
+0.3
+0.0
plant
Upstate
+0.5
+0.2
+0.5
-0.0
+0.1
control
PDB
+0.0
+0.5
+1.0
+0.4
+0.1
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DDA3937_RS14080
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