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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS22350 and DDA3937_RS23495 are separated by 186 nucleotides
DDA3937_RS23495 and DDA3937_RS13905 are separated by 312 nucleotides
DDA3937_RS13905 and DDA3937_RS13910 are separated by 208 nucleotides
DDA3937_RS13910 and DDA3937_RS22355 are separated by 235 nucleotides
DDA3937_RS22350: DDA3937_RS22350 - hypothetical protein, at 3,161,879 to 3,162,837
_RS22350
DDA3937_RS23495: DDA3937_RS23495 - hypothetical protein, at 3,163,024 to 3,163,671
_RS23495
DDA3937_RS13905: DDA3937_RS13905 - hypothetical protein, at 3,163,984 to 3,164,427
_RS13905
DDA3937_RS13910: DDA3937_RS13910 - hypothetical protein, at 3,164,636 to 3,165,183
_RS13910
DDA3937_RS22355: DDA3937_RS22355 - mobilization protein mobC, at 3,165,419 to 3,165,553
_RS22355
Group
Condition
DDA3937
_RS22350
DDA3937
_RS23495
DDA3937
_RS13905
DDA3937
_RS13910
DDA3937
_RS22355
control
PDB
-0.5
-2.7
-0.5
-0.5
-0.2
control
PDB
-0.8
-2.8
-0.6
-0.2
+1.0
control
PDB
-0.4
-0.5
+0.1
-0.9
-1.4
carbon source
M9+glucose+arginine
-0.2
-0.2
-1.0
-0.5
-1.1
control
PDB
-1.5
-1.2
-0.4
-0.1
+0.2
control
LB
-0.2
-0.2
-0.5
-0.5
-1.4
carbon source
M9+glucose
-0.1
-0.3
-0.4
-0.4
-1.2
control
LB
-0.2
-0.2
-0.1
-0.4
-1.5
carbon source
M9+glucose
-0.4
-0.8
+0.1
-0.4
-0.5
control
PDB
-0.2
-0.0
-0.7
-0.4
-0.7
control
LB
-0.1
-0.6
-0.1
-0.4
-0.9
stress
3.75mM_PTB
-0.0
-1.1
-0.5
-0.0
-0.3
plant
Stem-Norland
+0.1
-0.9
+0.1
-0.3
-0.9
carbon source
M9+glucose+arginine
-0.3
-1.0
-0.1
-0.5
+0.1
carbon source
M9+glucose
-0.5
-0.2
-0.3
-0.3
-0.6
stress
3.75mM_PTB
-0.1
-0.4
-0.3
-0.2
-0.8
control
PDB
-0.4
-0.6
-0.5
-0.3
-0.0
carbon source
M9+glucose+arginine
-0.4
-0.4
+0.2
-0.5
-0.3
plant
Norland
-0.5
-0.8
+0.3
-0.1
+0.2
carbon source
M9+glycerol
-0.5
+0.7
-0.2
-0.4
-0.5
plant
Upstate
-0.4
-1.2
+0.7
+0.2
+0.0
carbon source
M9+starch
-0.5
-0.6
-0.2
-0.0
+0.6
carbon source
M9+glycerol
-0.3
+0.6
-0.2
-0.1
-0.5
plant
Atlantic
+0.0
-0.3
-0.4
+0.0
+1.1
plant
Atlantic
-0.5
+1.1
+0.0
-0.1
+0.4
plant
Stem-Atlantic
+0.2
+0.9
+0.3
-0.1
-0.3
plant
Atlantic
-0.7
-0.1
-0.7
-0.1
+2.7
plant
Upstate
-0.0
+1.7
+0.3
-0.1
-0.7
plant
Upstate
-0.3
+0.5
+0.1
+0.0
+0.9
plant
Stem-Atlantic
+0.1
+1.4
+0.9
-0.1
-0.8
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DDA3937_RS13905
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