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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS13465 and DDA3937_RS13470 are separated by 66 nucleotides
DDA3937_RS13470 and DDA3937_RS13475 are separated by 12 nucleotides
DDA3937_RS13475 and DDA3937_RS13480 are separated by 33 nucleotides
DDA3937_RS13480 and DDA3937_RS13485 are separated by 166 nucleotides
DDA3937_RS13465: DDA3937_RS13465 - flagellar hook protein FlgE, at 3,070,498 to 3,071,697
_RS13465
DDA3937_RS13470: DDA3937_RS13470 - flagellar hook assembly protein FlgD, at 3,071,764 to 3,072,435
_RS13470
DDA3937_RS13475: DDA3937_RS13475 - flagellar basal body rod protein FlgC, at 3,072,448 to 3,072,852
_RS13475
DDA3937_RS13480: DDA3937_RS13480 - flagellar basal body rod protein FlgB, at 3,072,886 to 3,073,305
_RS13480
DDA3937_RS13485: DDA3937_RS13485 - flagellar basal body P-ring formation protein FlgA, at 3,073,472 to 3,074,140
_RS13485
Group
Condition
DDA3937
_RS13465
DDA3937
_RS13470
DDA3937
_RS13475
DDA3937
_RS13480
DDA3937
_RS13485
plant
Stem-Atlantic
-3.8
-4.4
-2.0
-5.6
-4.0
plant
Stem-Atlantic
-3.3
-3.6
-2.6
-4.8
-3.7
plant
Stem-Atlantic
-2.9
-3.6
-2.9
-4.1
-2.9
plant
Stem-Norland
-3.0
-2.9
-2.2
-3.9
-3.2
plant
Stem-Norland
-3.4
-3.0
-2.2
-3.4
-3.1
plant
Stem-Norland
-3.0
-2.5
-2.8
-3.1
-3.3
plant
Stem-Norland
-3.3
-3.2
-1.5
-3.6
-2.9
plant
Stem-Atlantic
-2.5
-3.8
-1.3
-3.6
-1.9
plant
Stem-Atlantic
-2.5
-2.6
-1.9
-2.5
-2.4
plant
Stem-Norland
-2.4
-2.8
-2.7
-1.6
-2.1
control
LB
-0.8
-1.1
-0.8
-0.8
-0.9
control
LB
-0.9
-0.8
-0.9
-0.9
-0.9
control
LB
-0.8
-0.7
-1.0
-0.4
-0.8
carbon source
M9+polygalacturonate
-0.7
-0.6
-1.0
-0.9
-0.5
plant
Upstate
-0.7
-0.7
-0.8
-0.7
-0.7
carbon source
M9+sucrose
+0.9
+0.9
+0.7
+1.2
+0.7
carbon source
M9+sucrose
+0.9
+1.0
+0.7
+0.9
+1.0
carbon source
M9+sucrose
+0.9
+0.9
+0.8
+1.1
+0.9
carbon source
M9+glucose+arginine
+1.9
+1.8
+1.5
+2.1
+1.7
carbon source
M9+glucose
+1.8
+1.8
+1.6
+2.1
+1.8
carbon source
M9+glucose+arginine
+2.1
+2.1
+1.9
+2.2
+2.0
carbon source
M9+glucose+arginine
+2.1
+2.0
+1.7
+2.4
+2.0
carbon source
M9+glucose
+2.1
+2.0
+1.9
+2.2
+2.1
carbon source
M9+glucose
+2.3
+2.3
+2.3
+2.6
+2.2
carbon source
M9+glycerol
+2.7
+2.7
+2.6
+3.1
+2.5
carbon source
M9+glycerol
+2.9
+3.0
+2.5
+2.9
+2.8
carbon source
M9+glycerol
+2.9
+3.1
+2.6
+3.2
+2.9
carbon source
M9+glycerol
+3.1
+3.2
+2.9
+3.3
+3.2
carbon source
M9+glycerol
+3.0
+3.1
+3.0
+3.2
+3.5
carbon source
M9+glycerol
+3.3
+3.6
+3.0
+3.5
+3.2
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