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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS13450 and DDA3937_RS13455 are separated by 133 nucleotides
DDA3937_RS13455 and DDA3937_RS13460 are separated by 26 nucleotides
DDA3937_RS13460 and DDA3937_RS13465 are separated by 21 nucleotides
DDA3937_RS13465 and DDA3937_RS13470 are separated by 66 nucleotides
DDA3937_RS13450: DDA3937_RS13450 - flagellar basal body L-ring protein FlgH, at 3,068,062 to 3,068,778
_RS13450
DDA3937_RS13455: DDA3937_RS13455 - flagellar basal-body rod protein FlgG, at 3,068,912 to 3,069,694
_RS13455
DDA3937_RS13460: DDA3937_RS13460 - flagellar basal body rod protein FlgF, at 3,069,721 to 3,070,476
_RS13460
DDA3937_RS13465: DDA3937_RS13465 - flagellar hook protein FlgE, at 3,070,498 to 3,071,697
_RS13465
DDA3937_RS13470: DDA3937_RS13470 - flagellar hook assembly protein FlgD, at 3,071,764 to 3,072,435
_RS13470
Group
Condition
DDA3937
_RS13450
DDA3937
_RS13455
DDA3937
_RS13460
DDA3937
_RS13465
DDA3937
_RS13470
plant
Stem-Atlantic
-3.5
-4.7
-3.2
-3.8
-4.4
plant
Stem-Atlantic
-2.8
-3.1
-3.2
-3.3
-3.6
plant
Stem-Norland
-3.6
-3.1
-2.8
-3.4
-3.0
plant
Stem-Norland
-3.1
-3.4
-3.0
-3.0
-2.9
plant
Stem-Atlantic
-2.5
-3.4
-2.7
-2.9
-3.6
plant
Stem-Norland
-2.6
-3.4
-2.4
-3.3
-3.2
plant
Stem-Atlantic
-2.0
-2.7
-2.4
-2.5
-3.8
plant
Stem-Norland
-2.4
-2.6
-2.2
-3.0
-2.5
plant
Stem-Atlantic
-2.4
-2.8
-2.0
-2.5
-2.6
plant
Stem-Norland
-2.2
-2.5
-2.2
-2.4
-2.8
control
LB
-0.9
-0.9
-0.8
-0.8
-1.1
control
LB
-0.9
-0.8
-0.8
-0.9
-0.8
control
LB
-0.8
-0.7
-0.8
-0.8
-0.7
control
LB
-0.8
-0.9
-0.7
-0.7
-0.7
plant
Upstate
-0.8
-0.6
-0.7
-0.7
-0.7
carbon source
M9+sucrose
+0.8
+0.8
+1.0
+0.9
+0.9
carbon source
M9+sucrose
+0.8
+1.0
+0.9
+0.9
+0.9
carbon source
M9+sucrose
+0.8
+1.0
+0.9
+0.9
+1.0
carbon source
M9+glucose
+1.7
+1.8
+1.9
+1.8
+1.8
carbon source
M9+glucose+arginine
+1.8
+1.8
+1.9
+1.9
+1.8
carbon source
M9+glucose+arginine
+1.9
+2.0
+2.0
+2.1
+2.0
carbon source
M9+glucose+arginine
+1.9
+2.0
+2.1
+2.1
+2.1
carbon source
M9+glucose
+1.8
+2.2
+2.2
+2.1
+2.0
carbon source
M9+glucose
+2.2
+2.2
+2.2
+2.3
+2.3
carbon source
M9+glycerol
+2.6
+2.5
+2.9
+2.7
+2.7
carbon source
M9+glycerol
+3.1
+2.7
+2.7
+2.9
+3.1
carbon source
M9+glycerol
+2.9
+3.3
+2.9
+2.9
+3.0
carbon source
M9+glycerol
+3.1
+3.0
+2.9
+3.0
+3.1
carbon source
M9+glycerol
+3.2
+3.1
+3.2
+3.1
+3.2
carbon source
M9+glycerol
+3.5
+3.3
+3.3
+3.3
+3.6
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