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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS13380 and DDA3937_RS13385 are separated by 8 nucleotides
DDA3937_RS13385 and DDA3937_RS13390 are separated by 2 nucleotides
DDA3937_RS13390 and DDA3937_RS13395 are separated by 133 nucleotides
DDA3937_RS13395 and DDA3937_RS13400 are separated by 5 nucleotides
DDA3937_RS13380: DDA3937_RS13380 - flagellum-specific ATP synthase FliI, at 3,055,311 to 3,056,681
_RS13380
DDA3937_RS13385: DDA3937_RS13385 - flagella biosynthesis chaperone FliJ, at 3,056,690 to 3,057,130
_RS13385
DDA3937_RS13390: DDA3937_RS13390 - flagellar hook-length control protein FliK, at 3,057,133 to 3,058,458
_RS13390
DDA3937_RS13395: DDA3937_RS13395 - flagellar basal body-associated protein FliL, at 3,058,592 to 3,059,080
_RS13395
DDA3937_RS13400: DDA3937_RS13400 - flagellar motor switch protein FliM, at 3,059,086 to 3,060,102
_RS13400
Group
Condition
DDA3937
_RS13380
DDA3937
_RS13385
DDA3937
_RS13390
DDA3937
_RS13395
DDA3937
_RS13400
plant
Stem-Atlantic
-3.3
-4.5
-3.2
-3.9
-3.8
plant
Stem-Atlantic
-3.8
-4.5
-3.7
-2.9
-3.4
plant
Stem-Norland
-3.4
-4.6
-3.1
-3.4
-3.6
plant
Stem-Norland
-3.4
-4.4
-3.4
-2.8
-3.8
plant
Stem-Norland
-3.3
-4.4
-2.8
-2.9
-3.3
plant
Stem-Atlantic
-2.7
-4.4
-2.4
-2.5
-3.8
plant
Stem-Atlantic
-2.9
-4.0
-2.9
-2.7
-3.1
plant
Stem-Atlantic
-2.3
-3.5
-2.6
-2.4
-2.4
plant
Stem-Norland
-2.8
-2.6
-2.2
-2.8
-2.4
plant
Stem-Norland
-2.2
-2.8
-2.3
-2.2
-2.6
control
LB
-0.7
-0.9
-0.9
-0.6
-0.7
control
LB
-0.8
-0.8
-0.9
-0.4
-0.8
control
LB
-0.7
-0.8
-0.8
-0.4
-0.8
plant
Upstate
-0.5
-1.1
-0.7
-0.9
-0.3
plant
Atlantic
+0.8
+0.7
+0.9
+0.5
+0.6
carbon source
M9+sucrose
+1.1
+0.9
+0.9
+0.5
+1.0
carbon source
M9+sucrose
+1.2
+1.1
+0.9
+0.6
+1.0
carbon source
M9+sucrose
+1.2
+1.1
+0.8
+0.6
+1.0
carbon source
M9+glucose
+2.0
+2.0
+1.4
+1.2
+1.8
carbon source
M9+glucose+arginine
+2.1
+2.0
+1.9
+1.2
+1.9
carbon source
M9+glucose+arginine
+2.1
+2.0
+2.2
+1.1
+2.0
carbon source
M9+glucose+arginine
+2.2
+2.3
+2.0
+1.0
+2.0
carbon source
M9+glucose
+2.2
+2.3
+1.8
+1.2
+2.1
carbon source
M9+glucose
+2.6
+2.4
+2.2
+1.5
+2.4
carbon source
M9+glycerol
+3.0
+3.0
+2.7
+2.3
+3.2
carbon source
M9+glycerol
+3.2
+3.0
+3.6
+2.0
+3.2
carbon source
M9+glycerol
+3.6
+3.0
+2.9
+2.6
+3.7
carbon source
M9+glycerol
+3.6
+3.5
+3.3
+2.5
+3.4
carbon source
M9+glycerol
+3.5
+3.0
+3.6
+2.4
+3.7
carbon source
M9+glycerol
+4.0
+3.5
+3.9
+2.9
+4.0
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DDA3937_RS13390
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