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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS13115 and DDA3937_RS13120 are separated by 154 nucleotides
DDA3937_RS13120 and DDA3937_RS13125 are separated by 13 nucleotides
DDA3937_RS13125 and DDA3937_RS13130 are separated by 19 nucleotides
DDA3937_RS13130 and DDA3937_RS13135 are separated by 6 nucleotides
DDA3937_RS13115: DDA3937_RS13115 - acyl carrier protein, at 2,993,083 to 2,993,319
_RS13115
DDA3937_RS13120: DDA3937_RS13120 - 3-oxoacyl-ACP reductase FabG, at 2,993,474 to 2,994,208
_RS13120
DDA3937_RS13125: DDA3937_RS13125 - ACP S-malonyltransferase, at 2,994,222 to 2,995,151
_RS13125
DDA3937_RS13130: DDA3937_RS13130 - ketoacyl-ACP synthase III, at 2,995,171 to 2,996,121
_RS13130
DDA3937_RS13135: DDA3937_RS13135 - phosphate acyltransferase PlsX, at 2,996,128 to 2,997,174
_RS13135
Group
Condition
DDA3937
_RS13115
DDA3937
_RS13120
DDA3937
_RS13125
DDA3937
_RS13130
DDA3937
_RS13135
control
LB
N.D.
N.D.
N.D.
N.D.
-1.6
control
LB
N.D.
N.D.
N.D.
N.D.
-1.5
carbon source
M9+glucose
N.D.
N.D.
N.D.
N.D.
-1.4
carbon source
M9+sucrose
N.D.
N.D.
N.D.
N.D.
-1.4
carbon source
M9+glucose
N.D.
N.D.
N.D.
N.D.
-1.2
carbon source
M9+glucose
N.D.
N.D.
N.D.
N.D.
-1.2
carbon source
M9+glucose+arginine
N.D.
N.D.
N.D.
N.D.
-1.1
control
LB
N.D.
N.D.
N.D.
N.D.
-1.1
carbon source
M9+polygalacturonate
N.D.
N.D.
N.D.
N.D.
-1.1
carbon source
M9+polygalacturonate
N.D.
N.D.
N.D.
N.D.
-0.9
control
LB
N.D.
N.D.
N.D.
N.D.
-0.9
plant
Upstate
N.D.
N.D.
N.D.
N.D.
-0.9
plant
Upstate
N.D.
N.D.
N.D.
N.D.
-0.8
carbon source
M9+sucrose
N.D.
N.D.
N.D.
N.D.
-0.8
plant
Upstate
N.D.
N.D.
N.D.
N.D.
-0.8
carbon source
M9+sucrose
N.D.
N.D.
N.D.
N.D.
-0.7
plant
Upstate
N.D.
N.D.
N.D.
N.D.
-0.7
carbon source
M9+polygalacturonate
N.D.
N.D.
N.D.
N.D.
-0.7
plant
Norland
N.D.
N.D.
N.D.
N.D.
-0.7
stress
1.88mM_PTB
N.D.
N.D.
N.D.
N.D.
-0.7
stress
7.5mM_PTB
N.D.
N.D.
N.D.
N.D.
-0.6
plant
Atlantic
N.D.
N.D.
N.D.
N.D.
-0.6
carbon source
M9+glucose+arginine
N.D.
N.D.
N.D.
N.D.
-0.6
control
PDB
N.D.
N.D.
N.D.
N.D.
+0.7
plant
Stem-Atlantic
N.D.
N.D.
N.D.
N.D.
+0.7
control
PDB
N.D.
N.D.
N.D.
N.D.
+0.7
control
PDB
N.D.
N.D.
N.D.
N.D.
+0.8
control
PDB
N.D.
N.D.
N.D.
N.D.
+0.8
control
PDB
N.D.
N.D.
N.D.
N.D.
+0.9
plant
Stem-Norland
N.D.
N.D.
N.D.
N.D.
+1.1
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