Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS12660 and DDA3937_RS12665 overlap by 4 nucleotidesDDA3937_RS12665 and DDA3937_RS12670 overlap by 11 nucleotidesDDA3937_RS12670 and DDA3937_RS12675 overlap by 4 nucleotidesDDA3937_RS12675 and DDA3937_RS12680 overlap by 4 nucleotides DDA3937_RS12660: DDA3937_RS12660 - type II secretion system protein M, at 2,880,110 to 2,880,571 _RS12660 DDA3937_RS12665: DDA3937_RS12665 - general secretion pathway protein GspL, at 2,880,568 to 2,881,743 _RS12665 DDA3937_RS12670: DDA3937_RS12670 - general secretion pathway protein GspK, at 2,881,733 to 2,882,653 _RS12670 DDA3937_RS12675: DDA3937_RS12675 - prepilin-type N-terminal cleavage/methylation domain-containing protein, at 2,882,650 to 2,883,195 _RS12675 DDA3937_RS12680: DDA3937_RS12680 - type II secretion system protein, at 2,883,192 to 2,883,560 _RS12680
Group Condition DDA3937_RS12660 DDA3937_RS12665 DDA3937_RS12670 DDA3937_RS12675 DDA3937_RS12680
control PDB -1.4 -0.3 -0.9 +0.1 -0.7
control PDB -1.0 +0.4 -0.2 -0.6 -1.0
plant Atlantic -0.5 -0.3 -0.1 +0.2 -1.3
control PDB -0.7 -0.2 -0.4 -0.3 -0.4
plant Stem-Norland -0.6 -0.1 -0.3 -0.3 -0.5
control PDB +0.2 +0.5 +0.5 -0.5 -2.3
carbon source M9+glucose+arginine -1.0 +0.2 -0.1 +0.2 -0.7
plant Stem-Atlantic -0.8 -0.1 -0.2 -0.2 -0.1
plant Stem-Atlantic -1.1 -0.5 +0.2 -0.0 +0.1
plant Atlantic -0.8 -0.1 +0.0 +0.1 -0.4
carbon source M9+glucose -0.6 +0.1 +0.0 +0.1 -0.6
plant Stem-Norland -0.7 +0.1 +0.3 +0.1 -0.6
plant Stem-Atlantic -0.8 -0.4 +0.2 -0.3 +0.5
carbon source M9+glycerol +0.3 -0.2 +0.1 -0.1 -0.6
control LB -0.1 +0.4 +0.2 -0.1 -0.7
control PDB +0.4 -0.2 +0.1 -0.2 -0.4
control PDB +1.0 -0.5 +0.4 -0.4 -0.8
plant Upstate +0.3 -0.1 +0.2 -0.2 -0.5
plant Atlantic -0.5 -0.3 +0.2 +0.6 -0.2
plant Stem-Norland +0.5 -0.1 -0.5 +0.2 -0.3
plant Upstate -0.5 +0.4 +0.0 +0.4 -0.2
carbon source M9+glycerol +0.3 +0.3 +0.4 -0.0 -0.6
plant Upstate -0.4 +0.2 +0.3 +0.4 -0.0
control LB +0.4 +0.1 +0.5 -0.0 -0.3
carbon source M9+glucose+arginine +0.3 -0.2 +0.2 +0.1 +0.6
plant Norland +1.0 -0.0 +0.0 +0.4 -0.2
plant Norland -0.0 +0.2 +0.5 +0.0 +0.5
plant Upstate +0.7 +0.7 +0.3 -0.0 -0.2
plant Norland +0.6 +0.2 +0.6 +0.2 +0.0
plant Norland +0.9 +0.2 +0.2 +0.7 +0.9
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