Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS12270 and DDA3937_RS12275 are separated by 358 nucleotidesDDA3937_RS12275 and DDA3937_RS12280 are separated by 114 nucleotidesDDA3937_RS12280 and DDA3937_RS12285 are separated by 24 nucleotidesDDA3937_RS12285 and DDA3937_RS12290 are separated by 305 nucleotides DDA3937_RS12270: DDA3937_RS12270 - ATP-dependent RNA helicase HrpA, at 2,787,406 to 2,791,293 _RS12270 DDA3937_RS12275: DDA3937_RS12275 - FMN-dependent NADH-azoreductase, at 2,791,652 to 2,792,257 _RS12275 DDA3937_RS12280: DDA3937_RS12280 - YnbE family lipoprotein, at 2,792,372 to 2,792,629 _RS12280 DDA3937_RS12285: DDA3937_RS12285 - YdbH family protein, at 2,792,654 to 2,795,257 _RS12285 DDA3937_RS12290: DDA3937_RS12290 - PAS domain-containing protein, at 2,795,563 to 2,797,116 _RS12290
Group Condition DDA3937_RS12270 DDA3937_RS12275 DDA3937_RS12280 DDA3937_RS12285 DDA3937_RS12290
plant Stem-Norland +0.2 -0.5 -0.8 -0.2 -0.4
control PDB +0.0 +0.2 -2.5 +0.1 +0.6
carbon source M9+glucose -0.5 -0.1 -0.7 -0.0 -0.3
control LB -0.1 -0.1 -0.7 +0.1 -0.3
plant Upstate +0.2 -0.9 -0.6 +0.1 +0.1
control PDB +0.2 +0.4 -1.3 -0.2 +0.0
plant Atlantic -0.2 +0.1 -1.0 +0.1 +0.1
plant Norland -0.3 -0.3 -1.1 +0.2 +0.6
plant Norland +0.1 +0.1 -0.9 -0.2 +0.2
plant Upstate +0.2 -0.1 -1.2 +0.2 +0.4
carbon source M9+glycerol +0.0 +0.3 -0.6 +0.2 -0.3
control PDB -0.4 +0.4 +0.1 -0.2 -0.2
plant Upstate +0.2 -0.2 -0.6 -0.2 +0.7
plant Atlantic +0.2 +0.1 -0.4 +0.3 -0.2
control PDB +0.1 +0.0 -0.8 +0.3 +0.3
plant Stem-Norland +0.1 +0.3 +0.2 +0.1 -0.6
plant Upstate -0.1 +0.7 -0.7 +0.1 +0.1
carbon source M9+glucose -0.5 +0.1 +0.7 -0.0 -0.0
plant Atlantic +0.1 +0.5 -0.8 +0.4 +0.1
carbon source M9+glucose -0.4 +0.5 +0.4 +0.1 -0.2
plant Norland +0.0 +0.9 -0.3 +0.1 -0.0
plant Stem-Atlantic -0.3 +0.3 +0.3 +0.5 +0.0
plant Stem-Atlantic +0.1 -0.1 +1.0 -0.2 +0.1
carbon source M9+glucose+arginine -0.4 +0.4 +0.9 +0.3 -0.2
carbon source M9+glucose+arginine -0.4 +0.6 +1.1 +0.0 -0.0
plant Norland -0.1 -0.1 +1.7 -0.3 +0.2
plant Stem-Atlantic +0.3 -0.1 +0.9 +0.1 +0.4
plant Stem-Norland +0.0 +0.1 +1.1 -0.1 +0.6
plant Stem-Atlantic +0.3 -0.2 +1.4 +0.2 +0.1
plant Stem-Norland +0.2 -0.5 +2.1 -0.1 +0.2
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