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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS12235 and DDA3937_RS12240 are separated by 75 nucleotides
DDA3937_RS12240 and DDA3937_RS12245 are separated by 345 nucleotides
DDA3937_RS12245 and DDA3937_RS12250 are separated by 310 nucleotides
DDA3937_RS12250 and DDA3937_RS12255 are separated by 83 nucleotides
DDA3937_RS12235: DDA3937_RS12235 - two-component system sensor histidine kinase RstB, at 2,779,334 to 2,780,689
_RS12235
DDA3937_RS12240: DDA3937_RS12240 - acid resistance repetitive basic protein Asr, at 2,780,765 to 2,781,349
_RS12240
DDA3937_RS12245: DDA3937_RS12245 - serine protease, at 2,781,695 to 2,782,513
_RS12245
DDA3937_RS12250: DDA3937_RS12250 - L-lactate permease, at 2,782,824 to 2,784,374
_RS12250
DDA3937_RS12255: DDA3937_RS12255 - (Fe-S)-binding protein, at 2,784,458 to 2,785,177
_RS12255
Group
Condition
DDA3937
_RS12235
DDA3937
_RS12240
DDA3937
_RS12245
DDA3937
_RS12250
DDA3937
_RS12255
control
PDB
+1.5
+1.0
-5.4
-0.2
+0.4
carbon source
M9+glycerol
+0.3
-1.0
-0.8
+0.2
-0.3
control
PDB
+1.3
+0.6
-2.9
-0.2
-0.5
plant
Upstate
+0.1
-0.6
-0.7
-0.1
-0.3
plant
Stem-Atlantic
-0.5
-0.5
+0.1
+0.1
-0.2
carbon source
M9+starch
+0.1
+0.2
-0.9
-0.1
-0.0
plant
Stem-Atlantic
-0.0
-0.6
+0.3
-0.0
-0.2
plant
Atlantic
+0.3
-0.7
-0.3
+0.1
+0.2
plant
Atlantic
-0.2
+0.3
-0.4
+0.1
-0.2
plant
Stem-Atlantic
-0.1
-0.8
+0.5
+0.1
-0.0
carbon source
M9+glucose
-0.2
+0.4
+0.1
+0.1
-0.4
carbon source
M9+glucose+arginine
+0.0
-0.4
+0.5
+0.0
-0.2
plant
Norland
-0.2
+0.1
-0.3
-0.1
+0.5
plant
Norland
+0.3
-1.2
+0.9
+0.3
-0.1
plant
Atlantic
+0.1
+0.5
-0.1
+0.0
-0.4
control
PDB
+1.2
+0.0
-0.8
+0.0
-0.2
plant
Stem-Atlantic
+0.1
+0.1
+0.5
-0.2
-0.2
plant
Upstate
+0.2
-0.2
+0.7
-0.1
-0.3
carbon source
M9+glycerol
+0.3
-0.3
+0.1
-0.0
+0.4
plant
Atlantic
+0.1
-0.7
+0.9
+0.1
+0.2
plant
Stem-Norland
-0.1
+0.5
+0.4
-0.1
-0.0
plant
Norland
-0.1
+0.6
+0.2
+0.2
-0.3
stress
3.75mM_PTB
-0.1
+0.3
+0.5
-0.0
+0.0
control
LB
-0.0
+0.3
+0.6
-0.1
-0.2
plant
Stem-Norland
-0.1
+0.3
+0.8
+0.1
-0.0
carbon source
M9+glycerol
+0.1
+0.6
+0.2
-0.0
+0.3
plant
Stem-Norland
+0.2
+0.8
+1.6
+0.0
+0.6
control
PDB
+1.7
+1.3
+0.9
-0.1
-0.6
control
PDB
+2.1
+1.1
+0.7
+0.1
+0.1
control
PDB
+2.5
+1.4
+0.7
+0.2
+0.0
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