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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS11770 and DDA3937_RS11775 are separated by 9 nucleotides
DDA3937_RS11775 and DDA3937_RS11780 are separated by 107 nucleotides
DDA3937_RS11780 and DDA3937_RS11785 are separated by 28 nucleotides
DDA3937_RS11785 and DDA3937_RS11790 are separated by 77 nucleotides
DDA3937_RS11770: DDA3937_RS11770 - amino acid ABC transporter ATP-binding protein, at 2,675,448 to 2,676,230
_RS11770
DDA3937_RS11775: DDA3937_RS11775 - aminotransferase class IV, at 2,676,240 to 2,677,157
_RS11775
DDA3937_RS11780: DDA3937_RS11780 - HAD family phosphatase, at 2,677,265 to 2,678,074
_RS11780
DDA3937_RS11785: DDA3937_RS11785 - MFS transporter, at 2,678,103 to 2,679,281
_RS11785
DDA3937_RS11790: DDA3937_RS11790 - histidinol-phosphatase, at 2,679,359 to 2,680,150
_RS11790
Group
Condition
DDA3937
_RS11770
DDA3937
_RS11775
DDA3937
_RS11780
DDA3937
_RS11785
DDA3937
_RS11790
plant
Stem-Atlantic
-1.8
-0.5
+0.3
-0.2
-0.0
plant
Norland
-2.0
-0.4
+0.0
+0.6
+0.0
plant
Norland
-1.5
+0.1
-0.2
+0.0
+0.2
plant
Atlantic
-1.5
+0.3
-0.0
+0.1
-0.2
carbon source
M9+sucrose
-0.5
-0.3
-0.4
-0.1
+0.1
plant
Norland
-1.3
+0.3
+0.1
+0.0
-0.2
carbon source
M9+glycerol
-0.6
+0.2
-0.3
-0.1
-0.1
plant
Atlantic
-0.7
-0.4
-0.0
+0.4
-0.2
carbon source
M9+polygalacturonate
-0.8
-0.0
-0.2
-0.1
+0.3
control
PDB
-0.9
+0.1
-0.1
+0.3
+0.2
stress
1.88mM_PTB
-0.5
+0.2
+0.1
+0.3
-0.5
stress
7.5mM_PTB
-0.5
+0.4
-0.2
-0.1
-0.1
stress
3.75mM_PTB
-0.7
+0.3
-0.1
+0.2
-0.0
carbon source
M9+glycerol
-0.1
+0.4
-0.2
+0.2
-0.6
plant
Atlantic
-0.7
+0.4
-0.2
+0.2
+0.2
plant
Stem-Atlantic
-0.5
+0.6
-0.0
-0.4
+0.2
plant
Atlantic
-0.3
-0.3
+0.4
+0.1
+0.2
control
PDB
-0.4
+0.3
-0.0
+0.4
-0.3
plant
Atlantic
-0.3
+0.1
-0.1
+0.5
-0.1
plant
Upstate
-1.2
+0.8
+0.0
+0.4
+0.2
plant
Stem-Norland
-0.2
+0.2
+0.3
+0.5
-0.3
control
PDB
-0.6
-0.1
+0.2
+0.6
+0.5
control
PDB
+0.2
+0.5
-0.8
+0.2
+0.5
control
PDB
-0.4
+0.1
-0.0
+1.1
+0.0
carbon source
M9+glucose+arginine
+0.5
-0.2
-0.1
+0.2
+0.5
plant
Stem-Atlantic
+0.8
+0.2
-0.2
+0.0
+0.2
plant
Stem-Norland
+0.5
+0.8
-0.2
+0.3
-0.2
carbon source
M9+glycerol
+0.9
+0.2
+0.1
+0.1
-0.0
plant
Stem-Atlantic
+1.5
+0.4
-0.3
+0.0
-0.1
plant
Stem-Norland
+2.7
+0.6
-0.3
-0.2
-0.2
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DDA3937_RS11780
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