Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS11465 and DDA3937_RS11470 are separated by 804 nucleotidesDDA3937_RS11470 and DDA3937_RS11475 are separated by 101 nucleotidesDDA3937_RS11475 and DDA3937_RS11480 overlap by 8 nucleotidesDDA3937_RS11480 and DDA3937_RS11485 are separated by 198 nucleotides DDA3937_RS11465: DDA3937_RS11465 - EAL domain-containing protein, at 2,601,375 to 2,603,546 _RS11465 DDA3937_RS11470: DDA3937_RS11470 - NADP-dependent isocitrate dehydrogenase, at 2,604,351 to 2,605,604 _RS11470 DDA3937_RS11475: DDA3937_RS11475 - 23S rRNA pseudouridine(2457) synthase RluE, at 2,605,706 to 2,606,362 _RS11475 DDA3937_RS11480: DDA3937_RS11480 - NUDIX hydrolase, at 2,606,355 to 2,606,813 _RS11480 DDA3937_RS11485: DDA3937_RS11485 - tRNA 2-thiouridine(34) synthase MnmA, at 2,607,012 to 2,608,124 _RS11485
Group Condition DDA3937_RS11465 DDA3937_RS11470 DDA3937_RS11475 DDA3937_RS11480 DDA3937_RS11485
plant Stem-Norland -1.9 N.D. +0.3 -1.0 N.D.
plant Stem-Atlantic -2.5 N.D. +0.3 -0.3 N.D.
plant Stem-Norland -2.2 N.D. +0.1 -0.3 N.D.
plant Stem-Norland -1.7 N.D. +0.3 -0.9 N.D.
plant Stem-Atlantic -1.6 N.D. +0.3 -0.9 N.D.
plant Stem-Atlantic -2.3 N.D. +0.0 +0.0 N.D.
plant Stem-Norland -1.9 N.D. +0.1 -0.1 N.D.
carbon source M9+polygalacturonate -1.4 N.D. -0.0 -0.4 N.D.
plant Stem-Atlantic -1.4 N.D. +0.2 -0.5 N.D.
plant Stem-Atlantic -2.4 N.D. -0.0 +0.7 N.D.
carbon source M9+polygalacturonate -1.1 N.D. -0.1 -0.3 N.D.
plant Stem-Norland -1.2 N.D. +0.2 -0.4 N.D.
carbon source M9+polygalacturonate -1.1 N.D. -0.1 -0.1 N.D.
plant Atlantic +0.1 N.D. -0.3 -0.9 N.D.
carbon source M9+glucose+arginine -0.3 N.D. +0.1 -0.7 N.D.
plant Norland +0.7 N.D. -0.2 -0.4 N.D.
plant Upstate +0.9 N.D. -0.1 -0.5 N.D.
control LB -0.4 N.D. +0.4 +0.3 N.D.
control PDB -0.4 N.D. +0.0 +1.0 N.D.
plant Norland +0.9 N.D. -0.2 +0.3 N.D.
plant Upstate +1.1 N.D. +0.1 +0.0 N.D.
plant Atlantic +1.1 N.D. +0.2 +0.1 N.D.
plant Upstate +1.1 N.D. +0.0 +0.3 N.D.
plant Upstate +1.8 N.D. +0.3 -0.3 N.D.
carbon source M9+glycerol +3.0 N.D. +0.5 -0.1 N.D.
carbon source M9+glycerol +3.9 N.D. +0.3 -0.5 N.D.
carbon source M9+glycerol +4.3 N.D. +0.2 -0.5 N.D.
carbon source M9+glycerol +4.0 N.D. +0.1 +0.0 N.D.
carbon source M9+glycerol +4.5 N.D. -0.2 -0.1 N.D.
carbon source M9+glycerol +4.2 N.D. +0.4 +0.1 N.D.
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DDA3937_RS11465
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DDA3937_RS11470
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DDA3937_RS11485
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