Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS11345 and DDA3937_RS11350 overlap by 8 nucleotidesDDA3937_RS11350 and DDA3937_RS11355 are separated by 13 nucleotidesDDA3937_RS11355 and DDA3937_RS11360 are separated by 14 nucleotidesDDA3937_RS11360 and DDA3937_RS11365 are separated by 249 nucleotides DDA3937_RS11345: DDA3937_RS11345 - sugar ABC transporter permease, at 2,577,218 to 2,578,108 _RS11345 DDA3937_RS11350: DDA3937_RS11350 - carbohydrate ABC transporter permease, at 2,578,101 to 2,579,003 _RS11350 DDA3937_RS11355: DDA3937_RS11355 - sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC, at 2,579,017 to 2,580,144 _RS11355 DDA3937_RS11360: DDA3937_RS11360 - carbohydrate ABC transporter substrate-binding protein, at 2,580,159 to 2,581,451 _RS11360 DDA3937_RS11365: DDA3937_RS11365 - oligogalacturonate-specific porin KdgM, at 2,581,701 to 2,582,411 _RS11365
Group Condition DDA3937_RS11345 DDA3937_RS11350 DDA3937_RS11355 DDA3937_RS11360 DDA3937_RS11365
plant Stem-Norland -1.9 -1.7 -1.8 -1.9 -1.7
plant Stem-Norland -0.9 -0.6 -0.8 -0.8 -3.9
plant Stem-Norland -1.2 -1.0 -1.2 -1.3 -1.5
plant Stem-Atlantic -1.1 -1.1 -0.7 -1.2 -1.7
plant Stem-Atlantic -0.6 -1.4 -0.7 -0.5 -1.8
control PDB -0.1 +0.0 -0.7 -0.6 -2.8
carbon source M9+polygalacturonate -0.6 -0.6 -0.8 -0.8 -1.3
plant Stem-Norland -0.9 -0.7 -0.7 -0.2 -1.5
plant Stem-Atlantic -0.6 -0.9 -0.5 -0.8 -0.9
carbon source M9+polygalacturonate -0.6 -0.7 -0.6 -0.7 -0.9
plant Stem-Atlantic -0.8 -0.7 -0.7 -0.9 -0.3
carbon source M9+polygalacturonate -0.6 -0.6 -0.7 -0.5 -0.9
plant Stem-Atlantic -0.5 -0.3 -0.0 -0.4 -2.0
plant Stem-Norland -0.5 -0.2 -0.4 -0.5 -1.4
carbon source M9+glucose+arginine -0.2 -0.5 -0.1 -0.1 -2.1
carbon source M9+glucose+arginine -0.4 -0.4 -0.1 -0.0 -1.0
control PDB +0.2 -0.2 +0.0 +0.1 -2.2
control PDB -0.1 +0.1 -0.1 -0.2 -1.7
plant Upstate +0.0 -0.2 +0.0 -0.6 -1.1
carbon source M9+glucose+arginine -0.2 -0.3 -0.2 -0.2 -1.0
carbon source M9+glucose -0.2 -0.2 -0.2 -0.2 -0.7
control LB -0.1 -0.0 +0.1 -0.1 -1.2
carbon source M9+starch -0.1 -0.2 +0.0 -0.4 -0.7
control PDB -0.1 +0.2 +0.0 -0.5 -0.7
plant Atlantic +0.0 +0.0 +0.4 -0.2 -0.8
plant Norland +0.4 +0.1 -0.0 +0.1 -1.1
plant Norland +0.1 +0.2 +0.2 -0.1 -1.0
plant Norland +0.2 +0.3 -0.4 +0.4 -0.5
plant Atlantic +0.4 +0.0 +0.4 +0.4 -0.9
plant Norland +0.0 +0.4 -0.3 +0.2 +0.7
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